Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 OR52K3P-201ENST00000531655 943 ntBASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 CTSLP2-201ENST00000580501 394 ntBASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 CBX3P2-202ENST00000583365 535 ntBASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 RBM11P1-201ENST00000604951 799 ntBASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 MIR6780B-201ENST00000610307 79 ntBASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 AC004241.2-201ENST00000614562 444 ntBASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 RMST_10.1-201ENST00000616309 154 ntBASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 AC090246.1-201ENST00000616499 426 ntBASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 Z69908.1-201ENST00000622603 247 ntBASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 AC008626.2-201ENST00000624425 248 ntBASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 AC092192.1-201ENST00000633154 1018 ntBASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 AL357140.4-201ENST00000636827 412 ntBASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 ECM1P2-201ENST00000503354 1577 ntBASIC6.91□□□□□ -1.3
FOXP3Q9BZS1 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 MTND5P29-201ENST00000458676 1807 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AC092634.1-201ENST00000366505 199 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 RNU6-1005P-201ENST00000384519 107 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AF274854.1-201ENST00000413236 615 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 EIF4A1P1-201ENST00000420241 934 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AC006509.1-201ENST00000420788 634 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 NMNAT1P2-201ENST00000435192 860 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AC092393.1-201ENST00000439625 742 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AL031667.1-201ENST00000440222 725 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 RPL12P49-201ENST00000441100 121 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 RPS27P5-201ENST00000444247 244 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 WDR82P2-201ENST00000444540 928 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 KF459542.1-201ENST00000450908 553 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 RPL31P11-202ENST00000454082 372 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 MEF2AP1-201ENST00000454867 863 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 GAPDHP53-201ENST00000458397 924 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 RPS7P11-201ENST00000484240 586 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 RN7SL350P-201ENST00000492591 299 ntBASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.9□□□□□ -1.3
FOXP3Q9BZS1 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms