Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC010132.2-201ENST00000295493 1043 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 Y_RNA.72-201ENST00000362894 103 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 RN7SKP78-201ENST00000364711 318 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 SNORA33.2-201ENST00000365413 134 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC092634.1-201ENST00000366505 199 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 RNU6-767P-201ENST00000384132 107 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 MT-TG-201ENST00000387429 68 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 RNU2-39P-201ENST00000410604 198 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 RPS7P15-201ENST00000415804 584 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 ZNF90P2-204ENST00000419323 1075 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 EEF1A1P34-201ENST00000419888 1267 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AL591896.1-201ENST00000420211 491 ntTSL 2 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC093084.1-201ENST00000424233 687 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 DNAJA1P6-201ENST00000437347 354 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 GTF2F2P2-201ENST00000445825 721 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 RN7SL372P-201ENST00000461982 298 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 RN7SL19P-201ENST00000462522 306 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 SNORA31.13-201ENST00000516624 135 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 OR5M4P-201ENST00000529436 925 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC107954.1-201ENST00000565906 727 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 CYP2C60P-201ENST00000566088 139 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC100830.2-201ENST00000581636 240 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC022916.3-201ENST00000592961 742 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 DYNLL1P1-201ENST00000595442 269 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC108451.2-201ENST00000603875 538 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 ACTR3BP1-201ENST00000605584 1247 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC012603.1-201ENST00000606424 528 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AL021368.3-201ENST00000607119 578 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC002401.3-201ENST00000620020 440 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 CASC19-212ENST00000641153 1287 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC7.4□□□□□ -1.22
CNTNAP3Q9BZ76 AC000367.1-201ENST00000452711 1766 ntBASIC7.4□□□□□ -1.23
CNTNAP3Q9BZ76 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
CNTNAP3Q9BZ76 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC7.4□□□□□ -1.23
CNTNAP3Q9BZ76 ADAM2-202ENST00000347580 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
CNTNAP3Q9BZ76 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CNTNAP3Q9BZ76 ATG13-201ENST00000359513 4348 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CNTNAP3Q9BZ76 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CNTNAP3Q9BZ76 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CNTNAP3Q9BZ76 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
CNTNAP3Q9BZ76 KLHL32-205ENST00000539200 3600 ntTSL 2 BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 HELQ-201ENST00000295488 3579 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 AL353807.3-201ENST00000500626 2505 ntBASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 MAPK10-343ENST00000641677 2546 ntBASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 AL669831.5-218ENST00000591702 1873 ntBASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 ZNF812P-201ENST00000457674 1694 ntBASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 GC-208ENST00000513476 1567 ntTSL 5 BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 CDY4P-201ENST00000418290 1513 ntBASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 AC103591.2-201ENST00000265259 766 ntBASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 Y_RNA.128-201ENST00000363391 112 ntBASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 SNORA4.3-201ENST00000365564 137 ntBASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 MIR559-201ENST00000385188 96 ntBASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 AC113608.1-201ENST00000398740 305 ntBASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
CNTNAP3Q9BZ76 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms