Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SSH2-209ENST00000579954 428 ntTSL 3 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 MIR4640-201ENST00000581824 90 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 MIR544B-201ENST00000582372 78 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 RN7SL44P-201ENST00000583849 302 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC005154.1-223ENST00000584372 547 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 OR4F8P-201ENST00000589943 937 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 ACP5-208ENST00000590420 301 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 TPMTP1-201ENST00000592307 737 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC010320.3-201ENST00000594865 447 ntTSL 3 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 BNIP3P23-201ENST00000599655 511 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC174071.1-201ENST00000603069 517 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC091810.1-201ENST00000603131 325 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC012507.3-201ENST00000603556 477 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AL391646.1-201ENST00000603860 190 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC087283.1-201ENST00000604029 1074 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AP001836.1-201ENST00000604675 523 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC018695.5-201ENST00000605872 315 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AP001521.1-201ENST00000609150 300 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC004853.2-201ENST00000609561 916 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 Y_RNA.812-201ENST00000610788 101 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 Y_RNA.784-201ENST00000613803 101 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AL442067.2-201ENST00000614033 363 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC027348.1-201ENST00000615979 615 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 Y_RNA.787-201ENST00000616522 101 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 Y_RNA.780-201ENST00000617336 101 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 Y_RNA.801-201ENST00000619005 101 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 MIR6744-201ENST00000619480 66 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC139768.1-201ENST00000620274 898 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AQP4-208ENST00000622234 891 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC021106.3-201ENST00000623925 531 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AL513327.1-208ENST00000624012 1047 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 LINC01727-204ENST00000624385 940 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 Metazoa_SRP.208-201ENST00000629083 297 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC015978.1-201ENST00000635343 890 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 RHOXF1P2-201ENST00000635431 502 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 MIR3662-201ENST00000637030 95 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 OLMALINC-206ENST00000641799 1195 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC006026.1-201ENST00000444025 1803 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 CTAGE11P-201ENST00000451540 2353 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 UGT2B27P-201ENST00000505092 1620 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 GLYATL1P1-201ENST00000528297 1607 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 APP-209ENST00000440126 2846 ntTSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 KLF8-204ENST00000468660 1543 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 ALDH7A1P1-201ENST00000510973 1533 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AC093225.1-201ENST00000506867 1408 ntBASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 ST7-213ENST00000432298 1956 ntTSL 2 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 DMD-228ENST00000541735 7080 ntTSL 5 BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
LCE3DQ9BYE3 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
LCE3DQ9BYE3 AC009044.1-201ENST00000624577 1798 ntBASIC2.15□□□□□ -2.06
LCE3DQ9BYE3 AC016930.1-201ENST00000468766 2205 ntBASIC2.15□□□□□ -2.06
LCE3DQ9BYE3 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
LCE3DQ9BYE3 BX322650.1-201ENST00000332359 2143 ntBASIC2.15□□□□□ -2.06
LCE3DQ9BYE3 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC2.15□□□□□ -2.06
LCE3DQ9BYE3 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms