Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.17
CHMP4AQ9BY43 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CHMP4AQ9BY43 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.71□□□□□ -1.17
CHMP4AQ9BY43 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
CHMP4AQ9BY43 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CHMP4AQ9BY43 CASC19-284ENST00000642142 1868 ntBASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 RNFT1P3-201ENST00000340898 1052 ntBASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 BTF3P9-201ENST00000418784 283 ntBASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 KIF4CP-201ENST00000422742 1279 ntBASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 AC097523.2-201ENST00000435551 652 ntBASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 AL512605.1-202ENST00000441919 381 ntBASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 AL359955.2-201ENST00000445380 353 ntBASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 CST12P-201ENST00000457644 362 ntBASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 AC021205.1-201ENST00000468797 348 ntBASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 OR52A4P-203ENST00000498233 1014 ntBASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 IGHV3-63-201ENST00000518422 341 ntBASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 RNU4ATAC-201ENST00000580972 127 ntBASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 AC010487.1-201ENST00000594408 1172 ntBASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 BMS1P7-201ENST00000602440 1052 ntBASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 AC023813.4-201ENST00000607580 580 ntBASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 AC114876.1-201ENST00000490962 1366 ntBASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CHMP4AQ9BY43 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 MTCO1P8-201ENST00000416914 1523 ntBASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 RN7SKP15-201ENST00000364742 309 ntBASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 NPM1P40-201ENST00000412758 733 ntBASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 SLC20A1P1-201ENST00000413906 956 ntBASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 KCTD9P1-201ENST00000430462 1167 ntBASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 MTCYBP29-201ENST00000436327 1006 ntBASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 RPL12P18-201ENST00000437175 325 ntBASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 AC104164.1-201ENST00000460282 590 ntBASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 RN7SL193P-201ENST00000491708 276 ntBASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 MIR4776-2-201ENST00000580204 80 ntBASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 COX6CP7-201ENST00000597056 208 ntBASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 AC004890.3-201ENST00000605566 1095 ntBASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 AC145423.1-201ENST00000605712 336 ntBASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 AL359742.1-201ENST00000622497 540 ntBASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 AL117378.2-201ENST00000622916 1337 ntBASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.7□□□□□ -1.18
CHMP4AQ9BY43 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 RNA5SP477-201ENST00000362639 119 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 RPS3AP2-201ENST00000407190 754 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 AC066692.1-201ENST00000421721 457 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 AC099677.3-201ENST00000427081 395 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 AL157385.1-201ENST00000446973 268 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 RN7SL269P-201ENST00000467795 305 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 AC124945.1-201ENST00000485133 188 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 OR5H7P-201ENST00000514084 930 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 AC091078.2-201ENST00000557145 559 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms