Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX3Q99909 VPS35P1-201ENST00000563400 1518 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 AC239868.2-201ENST00000564237 4527 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX3Q99909 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SSX3Q99909 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX3Q99909 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SSX3Q99909 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.09□□□□□ -1.59
SSX3Q99909 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSX3Q99909 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SSX3Q99909 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.09□□□□□ -1.59
SSX3Q99909 AL607077.1-201ENST00000401718 499 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 RNA5SP431-201ENST00000410312 120 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 RN7SKP144-201ENST00000411108 279 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 SETP15-201ENST00000412724 337 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.09□□□□□ -1.59
SSX3Q99909 AL035422.1-201ENST00000414193 397 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 GLUD1P9-201ENST00000420997 1173 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX3Q99909 HSPE1P16-201ENST00000426640 348 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.09□□□□□ -1.59
SSX3Q99909 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.09□□□□□ -1.59
SSX3Q99909 AL022237.1-201ENST00000446663 358 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX3Q99909 NPM1P39-201ENST00000449818 867 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 AC002553.2-201ENST00000453217 340 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 RN7SL326P-201ENST00000477493 296 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSX3Q99909 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX3Q99909 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX3Q99909 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.09□□□□□ -1.59
SSX3Q99909 OR4D12P-201ENST00000509361 911 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.09□□□□□ -1.59
SSX3Q99909 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX3Q99909 OR4A40P-201ENST00000533878 948 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.09□□□□□ -1.59
SSX3Q99909 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX3Q99909 AC067805.1-201ENST00000559344 470 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX3Q99909 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.09□□□□□ -1.59
SSX3Q99909 AP005262.1-201ENST00000582646 997 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 AC245128.3-201ENST00000594721 748 ntBASIC5.09□□□□□ -1.59
SSX3Q99909 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSX3Q99909 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX3Q99909 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.09□□□□□ -1.59
SSX3Q99909 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSX3Q99909 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSX3Q99909 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX3Q99909 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX3Q99909 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SSX3Q99909 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SSX3Q99909 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
SSX3Q99909 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.09□□□□□ -1.6
SSX3Q99909 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SSX3Q99909 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
SSX3Q99909 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SSX3Q99909 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SSX3Q99909 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SSX3Q99909 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SSX3Q99909 IFIT1P1-201ENST00000400497 1449 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 AL137141.1-201ENST00000624622 4836 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 TRIM51GP-201ENST00000534741 1350 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.08□□□□□ -1.6
SSX3Q99909 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.08□□□□□ -1.6
SSX3Q99909 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 AC083799.1-201ENST00000366451 910 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 AC233289.1-201ENST00000403700 508 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SSX3Q99909 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.08□□□□□ -1.6
SSX3Q99909 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 OR6C64P-201ENST00000419708 825 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.08□□□□□ -1.6
SSX3Q99909 AC007064.3-201ENST00000422608 359 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.08□□□□□ -1.6
SSX3Q99909 AC069154.1-201ENST00000432914 542 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.08□□□□□ -1.6
SSX3Q99909 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.08□□□□□ -1.6
SSX3Q99909 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.08□□□□□ -1.6
SSX3Q99909 AC009963.3-201ENST00000458090 486 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 LARP7P4-201ENST00000481075 878 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.08□□□□□ -1.6
SSX3Q99909 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.08□□□□□ -1.6
SSX3Q99909 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.08□□□□□ -1.6
SSX3Q99909 AC011411.1-201ENST00000509592 876 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.08□□□□□ -1.6
SSX3Q99909 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SSX3Q99909 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
SSX3Q99909 AC117525.1-201ENST00000515228 503 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 AC138832.1-201ENST00000522871 556 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms