Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 IGKV2-23-201ENST00000518729 323 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AC067852.5-201ENST00000589299 310 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AL034374.2-201ENST00000605281 548 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AC112200.1-201ENST00000625015 234 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AC006206.1-201ENST00000544842 3387 ntBASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AL132640.2-201ENST00000559968 1698 ntBASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 RPL23AP83-201ENST00000434984 473 ntBASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AC063943.1-201ENST00000465434 453 ntBASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 RPL23AP40-201ENST00000487630 390 ntBASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 HMGB1P40-201ENST00000525121 540 ntBASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 MIR4691-201ENST00000583764 85 ntBASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 MR1-205ENST00000434571 7479 ntTSL 5 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AL365220.1-201ENST00000432923 399 ntBASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 RPL7L1P3-201ENST00000455249 689 ntBASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AC011005.3-201ENST00000491624 395 ntBASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AC139697.1-201ENST00000548429 745 ntBASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 RNA5SP447-201ENST00000363749 119 ntBASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 RNU1-146P-201ENST00000364015 165 ntBASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AC020890.1-201ENST00000491837 504 ntBASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AC079414.3-201ENST00000612986 1090 ntBASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 AC099494.2-201ENST00000623371 978 ntBASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CSMD1Q96PZ7 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 AC005224.3-201ENST00000584683 2140 ntBASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 AL139039.2-201ENST00000407436 479 ntBASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 SNORD46.1-201ENST00000364139 104 ntBASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 HSPD1P12-201ENST00000429127 1069 ntBASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 OR8G5-201ENST00000524943 1041 ntBASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 AL121834.1-201ENST00000572284 509 ntBASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 AC004890.3-201ENST00000605566 1095 ntBASIC4.53□□□□□ -1.68
CSMD1Q96PZ7 AC138907.8-201ENST00000623981 2256 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms