Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC010168.2-201ENST00000562691 5428 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 AC020978.6-201ENST00000571197 3177 ntBASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCHD1Q96NR3 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
PTCHD1Q96NR3 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PTCHD1Q96NR3 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PTCHD1Q96NR3 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PTCHD1Q96NR3 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PTCHD1Q96NR3 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PTCHD1Q96NR3 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PTCHD1Q96NR3 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PTCHD1Q96NR3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PTCHD1Q96NR3 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
PTCHD1Q96NR3 MTCO1P28-201ENST00000574177 1528 ntBASIC6.46□□□□□ -1.37
PTCHD1Q96NR3 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.46□□□□□ -1.37
PTCHD1Q96NR3 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.46□□□□□ -1.37
PTCHD1Q96NR3 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PTCHD1Q96NR3 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PTCHD1Q96NR3 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PTCHD1Q96NR3 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.46□□□□□ -1.37
PTCHD1Q96NR3 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 Y_RNA.192-201ENST00000363977 102 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 RNA5SP152-201ENST00000365184 110 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 PPIAP26-201ENST00000377951 522 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 RPL9P21-201ENST00000392269 505 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AL512329.1-201ENST00000404600 1592 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 RN7SKP273-201ENST00000411392 314 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 RPL18AP14-201ENST00000417685 526 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 DUTP4-201ENST00000424782 475 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AL606662.1-201ENST00000445763 553 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 RN7SL834P-201ENST00000461450 286 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 RN7SL216P-201ENST00000471607 298 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC011979.1-201ENST00000472300 483 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 RN7SL267P-201ENST00000485107 261 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC069304.1-201ENST00000491593 704 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC026826.1-201ENST00000493002 361 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 RPL5P14-201ENST00000494197 878 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC021146.8-201ENST00000507455 733 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 Y_RNA.695-201ENST00000516715 107 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AP001804.1-201ENST00000526868 919 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 MIR4999-201ENST00000585029 91 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 NDUFB9P1-201ENST00000604683 510 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC096553.1-201ENST00000605169 829 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC004908.1-201ENST00000606572 541 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AL592148.2-201ENST00000612210 372 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC078880.4-201ENST00000617627 1749 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC005858.3-201ENST00000624756 589 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AL160394.1-201ENST00000624765 724 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 CASC19-281ENST00000642118 1554 ntBASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.46□□□□□ -1.38
PTCHD1Q96NR3 AC003985.2-201ENST00000562268 1669 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 AC022819.1-201ENST00000563495 3910 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 MAPK10-270ENST00000641102 3538 ntBASIC6.45□□□□□ -1.38
PTCHD1Q96NR3 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms