Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 HIRAP1-201ENST00000605318 787 ntBASIC9.08□□□□□ -0.96
TOPBP1Q92547 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
TOPBP1Q92547 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TOPBP1Q92547 MALAT1-202ENST00000534336 8708 ntBASIC9.08□□□□□ -0.96
TOPBP1Q92547 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC9.07□□□□□ -0.96
TOPBP1Q92547 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TOPBP1Q92547 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TOPBP1Q92547 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TOPBP1Q92547 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
TOPBP1Q92547 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TOPBP1Q92547 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
TOPBP1Q92547 AC092570.3-201ENST00000420113 693 ntBASIC9.07□□□□□ -0.96
TOPBP1Q92547 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC9.07□□□□□ -0.96
TOPBP1Q92547 TMEM183AP1-205ENST00000432739 290 ntBASIC9.07□□□□□ -0.96
TOPBP1Q92547 NDUFA5P8-201ENST00000449019 346 ntBASIC9.07□□□□□ -0.96
TOPBP1Q92547 AC067852.5-201ENST00000589299 310 ntBASIC9.07□□□□□ -0.96
TOPBP1Q92547 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
TOPBP1Q92547 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
TOPBP1Q92547 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
TOPBP1Q92547 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
TOPBP1Q92547 AC007996.1-201ENST00000620414 2821 ntBASIC9.07□□□□□ -0.96
TOPBP1Q92547 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
TOPBP1Q92547 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
TOPBP1Q92547 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TOPBP1Q92547 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
TOPBP1Q92547 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOPBP1Q92547 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
TOPBP1Q92547 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOPBP1Q92547 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC9.06□□□□□ -0.96
TOPBP1Q92547 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC9.06□□□□□ -0.96
TOPBP1Q92547 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC9.06□□□□□ -0.96
TOPBP1Q92547 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC9.06□□□□□ -0.96
TOPBP1Q92547 AL161722.1-201ENST00000446972 1032 ntBASIC9.06□□□□□ -0.96
TOPBP1Q92547 NDUFA12P1-201ENST00000455914 406 ntBASIC9.06□□□□□ -0.96
TOPBP1Q92547 RPS17P5-201ENST00000498293 408 ntBASIC9.06□□□□□ -0.96
TOPBP1Q92547 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC9.06□□□□□ -0.96
TOPBP1Q92547 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TOPBP1Q92547 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOPBP1Q92547 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOPBP1Q92547 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOPBP1Q92547 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
TOPBP1Q92547 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOPBP1Q92547 EIF3FP1-201ENST00000613970 806 ntBASIC9.06□□□□□ -0.96
TOPBP1Q92547 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC9.06□□□□□ -0.96
TOPBP1Q92547 AL356752.1-201ENST00000615844 593 ntBASIC9.06□□□□□ -0.96
TOPBP1Q92547 AC009704.2-201ENST00000618739 483 ntBASIC9.06□□□□□ -0.96
TOPBP1Q92547 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOPBP1Q92547 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOPBP1Q92547 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOPBP1Q92547 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC9.06□□□□□ -0.96
TOPBP1Q92547 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
TOPBP1Q92547 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOPBP1Q92547 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
TOPBP1Q92547 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TOPBP1Q92547 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TOPBP1Q92547 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
TOPBP1Q92547 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
TOPBP1Q92547 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC9.06□□□□□ -0.96
TOPBP1Q92547 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC9.06□□□□□ -0.96
TOPBP1Q92547 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TOPBP1Q92547 AL590399.4-201ENST00000436561 601 ntBASIC9.05□□□□□ -0.96
TOPBP1Q92547 AP000797.2-201ENST00000475768 606 ntBASIC9.05□□□□□ -0.96
TOPBP1Q92547 AC079080.1-201ENST00000479841 822 ntBASIC9.05□□□□□ -0.96
TOPBP1Q92547 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 H3F3BP2-201ENST00000583907 357 ntBASIC9.05□□□□□ -0.96
TOPBP1Q92547 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 AC009597.2-201ENST00000604659 592 ntBASIC9.05□□□□□ -0.96
TOPBP1Q92547 AC068831.8-201ENST00000620171 435 ntBASIC9.05□□□□□ -0.96
TOPBP1Q92547 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
TOPBP1Q92547 NXF4-202ENST00000416098 1465 ntBASIC9.05□□□□□ -0.96
TOPBP1Q92547 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
TOPBP1Q92547 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
TOPBP1Q92547 SNORA62-201ENST00000365493 153 ntBASIC9.05□□□□□ -0.96
TOPBP1Q92547 GAPDHP15-201ENST00000398586 975 ntBASIC9.05□□□□□ -0.96
TOPBP1Q92547 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 PRPF38AP2-201ENST00000438179 851 ntBASIC9.05□□□□□ -0.96
TOPBP1Q92547 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 AC068587.1-201ENST00000483613 781 ntBASIC9.05□□□□□ -0.96
TOPBP1Q92547 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 RN7SL356P-201ENST00000582228 248 ntBASIC9.05□□□□□ -0.96
TOPBP1Q92547 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
TOPBP1Q92547 AC092747.4-201ENST00000620519 1861 ntBASIC9.05□□□□□ -0.96
TOPBP1Q92547 AC006511.3-201ENST00000624929 1783 ntBASIC9.04□□□□□ -0.96
TOPBP1Q92547 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
TOPBP1Q92547 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
TOPBP1Q92547 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
TOPBP1Q92547 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
TOPBP1Q92547 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms