Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC020923.1-201ENST00000624021 917 ntBASIC5.98□□□□□ -1.45
LMO3Q8TAP4 AL390318.1-201ENST00000624564 687 ntBASIC5.98□□□□□ -1.45
LMO3Q8TAP4 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.98□□□□□ -1.45
LMO3Q8TAP4 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.98□□□□□ -1.45
LMO3Q8TAP4 AC140134.1-201ENST00000511830 3544 ntBASIC5.98□□□□□ -1.45
LMO3Q8TAP4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LMO3Q8TAP4 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LMO3Q8TAP4 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LMO3Q8TAP4 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LMO3Q8TAP4 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.98□□□□□ -1.45
LMO3Q8TAP4 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LMO3Q8TAP4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LMO3Q8TAP4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.98□□□□□ -1.45
LMO3Q8TAP4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
LMO3Q8TAP4 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.98□□□□□ -1.45
LMO3Q8TAP4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.98□□□□□ -1.45
LMO3Q8TAP4 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.98□□□□□ -1.45
LMO3Q8TAP4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
LMO3Q8TAP4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.98□□□□□ -1.45
LMO3Q8TAP4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 AP000641.1-201ENST00000531988 1639 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 AL137058.3-201ENST00000624531 3099 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 U3.28-201ENST00000391249 210 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 AL133482.1-201ENST00000415988 498 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 MTND6P12-201ENST00000428247 522 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 BX119321.1-201ENST00000428912 797 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 RPL23AP19-201ENST00000436229 369 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 AC019185.1-201ENST00000442718 389 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 RN7SL188P-201ENST00000469842 285 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 AC007998.1-201ENST00000474156 672 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 RNU6-467P-201ENST00000517027 110 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 IGBP1P1-201ENST00000554337 1009 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 AC090888.3-201ENST00000558917 509 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 H3F3BP2-201ENST00000583907 357 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 CU639417.4-201ENST00000623928 207 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 AC021766.1-201ENST00000624404 741 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 AP001153.1-201ENST00000641024 338 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.97□□□□□ -1.45
LMO3Q8TAP4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LMO3Q8TAP4 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.96□□□□□ -1.45
LMO3Q8TAP4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.96□□□□□ -1.45
LMO3Q8TAP4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.45
LMO3Q8TAP4 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
LMO3Q8TAP4 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 RNA5SP46-201ENST00000362370 120 ntBASIC5.96□□□□□ -1.46
LMO3Q8TAP4 RNA5SP514-201ENST00000363717 111 ntBASIC5.96□□□□□ -1.46
LMO3Q8TAP4 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 MIR621-201ENST00000384919 96 ntBASIC5.96□□□□□ -1.46
LMO3Q8TAP4 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 GAPDHP42-201ENST00000406848 981 ntBASIC5.96□□□□□ -1.46
LMO3Q8TAP4 GABARAPL3-201ENST00000412799 354 ntBASIC5.96□□□□□ -1.46
LMO3Q8TAP4 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.96□□□□□ -1.46
LMO3Q8TAP4 AL133173.1-201ENST00000423458 397 ntBASIC5.96□□□□□ -1.46
LMO3Q8TAP4 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.96□□□□□ -1.46
LMO3Q8TAP4 AC073465.2-201ENST00000440938 498 ntBASIC5.96□□□□□ -1.46
LMO3Q8TAP4 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 OR11H3P-201ENST00000554547 982 ntBASIC5.96□□□□□ -1.46
LMO3Q8TAP4 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 AC010547.6-201ENST00000571789 193 ntBASIC5.96□□□□□ -1.46
LMO3Q8TAP4 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LMO3Q8TAP4 AC016911.1-201ENST00000613297 452 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms