Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.2□□□□□ -1.1
SCUBE3Q8IX30 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC8.2□□□□□ -1.1
SCUBE3Q8IX30 HSP90AB7P-201ENST00000450068 2454 ntBASIC8.2□□□□□ -1.1
SCUBE3Q8IX30 AC006511.3-201ENST00000624929 1783 ntBASIC8.2□□□□□ -1.1
SCUBE3Q8IX30 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AC011447.7-201ENST00000624228 1590 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 Y_RNA.133-201ENST00000363428 110 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 Y_RNA.146-201ENST00000363549 102 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 SNORA4.3-201ENST00000365564 137 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 RNU6-196P-201ENST00000384315 107 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 SNORA70I-201ENST00000384544 135 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 MIR525-201ENST00000384978 85 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AC025750.1-201ENST00000399891 379 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AL451061.1-201ENST00000407887 862 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 MIR1284-201ENST00000408337 120 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AC211486.3-201ENST00000412694 621 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AC017104.2-201ENST00000417000 321 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 OR1AA1P-201ENST00000419597 916 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 PHBP4-201ENST00000437447 837 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 GAPDHP17-201ENST00000449858 1001 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 RGS5-217ENST00000451759 835 ntTSL 3 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AC093278.1-201ENST00000494700 600 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AC012170.1-201ENST00000495139 359 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 RN7SL388P-201ENST00000498736 339 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 THAP6-203ENST00000502620 582 ntTSL 3 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 ADI1P2-201ENST00000514945 429 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AC022878.1-201ENST00000530684 149 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 FDPSP3-201ENST00000556903 1013 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 OR4F28P-201ENST00000559128 938 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 RBM22P12-201ENST00000567098 1255 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 RN7SL237P-201ENST00000580912 287 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 OR4F8P-201ENST00000589943 937 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 BNIP3P23-201ENST00000599655 511 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AC005609.2-201ENST00000623320 592 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AC093591.3-201ENST00000634516 308 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AC183089.2-201ENST00000637931 916 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 USP48-203ENST00000374732 3037 ntTSL 2 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 MAPK10-347ENST00000641762 2856 ntBASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SCUBE3Q8IX30 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 Y_RNA.481-201ENST00000384373 102 ntBASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 AL603766.1-201ENST00000407763 664 ntBASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 AC109638.1-201ENST00000417406 326 ntBASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 GAPDHP55-201ENST00000423136 803 ntBASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 FTO-202ENST00000431610 707 ntTSL 3 BASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 AL606752.1-201ENST00000435442 666 ntBASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 CYCSP11-201ENST00000436426 315 ntBASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 Z98949.2-201ENST00000440996 144 ntBASIC8.18□□□□□ -1.1
SCUBE3Q8IX30 AL139156.3-201ENST00000454802 394 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms