Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM48Q8IWZ4 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.46□□□□□ -1.37
TRIM48Q8IWZ4 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
TRIM48Q8IWZ4 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TRIM48Q8IWZ4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.46□□□□□ -1.37
TRIM48Q8IWZ4 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TRIM48Q8IWZ4 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.46□□□□□ -1.37
TRIM48Q8IWZ4 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
TRIM48Q8IWZ4 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 Y_RNA.201-201ENST00000364052 96 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 RNU4-24P-201ENST00000364565 139 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 RPL12P23-201ENST00000405880 490 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 EIF4A1P1-201ENST00000420241 934 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 RPL23AP85-201ENST00000421838 433 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 RPS4XP16-201ENST00000427198 791 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 OR6R1P-201ENST00000431838 940 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC128677.1-201ENST00000436016 442 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 FGF7P5-201ENST00000441829 291 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 GAPDHP33-201ENST00000443168 1013 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC011742.2-201ENST00000443818 352 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 MYO5BP2-201ENST00000449815 1277 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 OTX2P1-201ENST00000450956 354 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 RPL31P3-201ENST00000458430 332 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC005165.2-201ENST00000466070 380 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 RPSAP39-201ENST00000467439 883 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 RPF2P2-201ENST00000504693 896 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC093870.1-201ENST00000506837 213 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC111000.2-201ENST00000507775 550 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC106800.2-201ENST00000514009 1103 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC008494.2-201ENST00000514544 370 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC138938.1-201ENST00000515431 782 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 RN7SKP34-201ENST00000516142 244 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 PTS-202ENST00000524931 696 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 SYPL1P2-201ENST00000582878 727 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC114477.1-201ENST00000605097 605 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC068726.1-201ENST00000610993 341 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC004241.2-201ENST00000614562 444 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AP000577.1-201ENST00000624366 878 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 MAPK10-357ENST00000641831 2858 ntBASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM48Q8IWZ4 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AC034229.2-201ENST00000566945 2508 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 OR52B5P-204ENST00000641744 3467 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 Y_RNA.51-201ENST00000362725 102 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 RNU6-31P-201ENST00000384388 108 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AL133260.1-201ENST00000405720 405 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms