Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC005042.1-201ENST00000393397 800 ntBASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AL133270.1-201ENST00000402635 279 ntBASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 RN7SKP151-201ENST00000410230 316 ntBASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 RN7SKP213-201ENST00000410746 298 ntBASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 HMGB1P32-201ENST00000425971 565 ntBASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AL450023.1-201ENST00000450868 751 ntBASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AURKAPS1-201ENST00000451805 1212 ntBASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AL022319.1-201ENST00000458183 1167 ntBASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AL603882.1-201ENST00000463059 681 ntBASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AL355032.1-201ENST00000472981 438 ntBASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AC004453.1-201ENST00000487895 408 ntBASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AC074255.1-201ENST00000511259 501 ntBASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 EIF4A2P5-201ENST00000529914 499 ntBASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 MTND2P17-201ENST00000550281 688 ntBASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AC091193.1-201ENST00000604640 448 ntBASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AC096586.2-201ENST00000610260 441 ntBASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 AC132068.1-201ENST00000623805 459 ntBASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.68□□□□□ -1.5
LYSMD4Q5XG99 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 AC110373.1-201ENST00000505994 3505 ntBASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 RN7SKP125-201ENST00000410481 302 ntBASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 RN7SKP216-201ENST00000411050 312 ntBASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 AC117434.1-201ENST00000419971 836 ntBASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 CYCSP6-201ENST00000434498 302 ntBASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 RPL12P3-201ENST00000440080 396 ntBASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 AL162739.1-201ENST00000450606 307 ntBASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 AP000547.1-201ENST00000454360 617 ntBASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 RPL7P45-201ENST00000455851 743 ntBASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 MTCYBP14-201ENST00000457471 715 ntBASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 RPL38P3-201ENST00000484463 213 ntBASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 OR52A4P-203ENST00000498233 1014 ntBASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 AC096754.1-201ENST00000508904 818 ntBASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 SNORA26.10-201ENST00000516427 141 ntBASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 OR4A46P-201ENST00000527255 933 ntBASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 AC027334.1-201ENST00000603257 310 ntBASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 AL157762.1-201ENST00000619612 415 ntBASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.67□□□□□ -1.5
LYSMD4Q5XG99 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD4Q5XG99 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms