Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 IFIT1P1-201ENST00000400497 1449 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 RNA5SP321-201ENST00000362722 111 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 RNU6-259P-201ENST00000383999 107 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 Y_RNA.509-201ENST00000384506 99 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 MCTS2P-201ENST00000394552 546 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 PRELID1P1-201ENST00000403549 660 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 RPL7P8-201ENST00000411964 730 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 RPS20P15-201ENST00000412792 311 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AC099782.1-201ENST00000425889 474 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AL121916.1-201ENST00000429405 308 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 MED14P1-201ENST00000430517 648 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 ANKRD54P1-201ENST00000433115 471 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AC092106.2-201ENST00000436597 487 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AC093155.1-201ENST00000440164 826 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AC007677.1-201ENST00000445757 515 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 KATNBL1P6-201ENST00000453433 915 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 MEF2AP1-201ENST00000454867 863 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 RN7SL216P-201ENST00000471607 298 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AC133963.2-201ENST00000513686 578 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 RNA5SP303-201ENST00000516192 130 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 Y_RNA.701-201ENST00000516812 110 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 SNRPCP6-201ENST00000528310 210 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 SAA3P-201ENST00000533267 365 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AC140063.1-201ENST00000541343 259 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 NTS-203ENST00000551529 801 ntTSL 3 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AL845552.1-201ENST00000556820 323 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 ULK4P2-202ENST00000564187 492 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 DYNLL1P1-201ENST00000595442 269 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 BNIP3P9-201ENST00000603714 553 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 QRSL1P1-201ENST00000400977 1540 ntBASIC8.74□□□□□ -1.01
RC3H1Q5TC82 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 TNFSF15-201ENST00000374044 2789 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AC006026.1-201ENST00000444025 1803 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AL353763.1-201ENST00000624467 1628 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 USP3-201ENST00000268049 5311 ntTSL 5 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 OR2AH1P-202ENST00000641232 2744 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 TINAG-203ENST00000370869 782 ntTSL 3 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 RNU6-1200P-201ENST00000384162 107 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 MT-TD-201ENST00000387419 68 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 NDUFA5P4-201ENST00000436704 385 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 UBBP5-201ENST00000446970 266 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AC007327.1-201ENST00000447461 264 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 NFU1P2-201ENST00000448700 469 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AC083806.1-201ENST00000468934 316 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 TMED11P-201ENST00000479478 690 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AC005017.1-201ENST00000482002 490 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AC113367.2-201ENST00000505749 160 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC8.73□□□□□ -1.01
RC3H1Q5TC82 IGHV7-34-1-201ENST00000519200 350 ntBASIC8.73□□□□□ -1.01
RC3H1Q5TC82 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC8.73□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms