Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC130360.2-201ENST00000533477 1556 ntBASIC5.87□□□□□ -1.47
PTPN20Q4JDL3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PTPN20Q4JDL3 AL078595.2-201ENST00000605309 1780 ntBASIC5.87□□□□□ -1.47
PTPN20Q4JDL3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN20Q4JDL3 AP000432.2-201ENST00000624164 2048 ntBASIC5.87□□□□□ -1.47
PTPN20Q4JDL3 AL162456.1-201ENST00000634535 2006 ntBASIC5.87□□□□□ -1.47
PTPN20Q4JDL3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PTPN20Q4JDL3 AC006600.2-201ENST00000624834 2506 ntBASIC5.87□□□□□ -1.47
PTPN20Q4JDL3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.87□□□□□ -1.47
PTPN20Q4JDL3 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PTPN20Q4JDL3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN20Q4JDL3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 AL354868.1-201ENST00000417077 482 ntBASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 AL133173.1-201ENST00000423458 397 ntBASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 OR6D1P-201ENST00000436165 939 ntBASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 HMGN1P36-201ENST00000446623 298 ntBASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 CU639417.4-201ENST00000623928 207 ntBASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 AP001962.1-201ENST00000624114 559 ntBASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.86□□□□□ -1.47
PTPN20Q4JDL3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 LINC01963-201ENST00000562038 3148 ntBASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 OR6E1P-201ENST00000414424 923 ntBASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 RIMKLBP2-201ENST00000424737 654 ntBASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 BX276092.6-201ENST00000430476 250 ntBASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 AC138761.5-201ENST00000433967 325 ntBASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 AC002504.1-201ENST00000438281 691 ntBASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 AP000281.1-201ENST00000444036 316 ntBASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 BX276092.8-201ENST00000455722 250 ntBASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 AC021106.1-201ENST00000509020 1058 ntBASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 AC109481.1-201ENST00000509173 282 ntBASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 AC090568.1-201ENST00000509499 856 ntBASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 AC111000.6-201ENST00000514471 709 ntBASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 MIR3614-201ENST00000581261 86 ntBASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 RNA5SP440-201ENST00000612665 119 ntBASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 AC008115.3-201ENST00000614874 549 ntBASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 AP001153.1-201ENST00000641024 338 ntBASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN20Q4JDL3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 AC007938.2-201ENST00000604666 2634 ntBASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 NCOA4P2-201ENST00000340589 1813 ntBASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms