Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC016717.3-201ENST00000624730 554 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
PCDH1Q08174 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDH1Q08174 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.98□□□□□ -1.29
PCDH1Q08174 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDH1Q08174 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC6.98□□□□□ -1.29
PCDH1Q08174 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
PCDH1Q08174 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
PCDH1Q08174 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDH1Q08174 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDH1Q08174 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 AC090181.3-201ENST00000624777 1514 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
PCDH1Q08174 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
PCDH1Q08174 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDH1Q08174 AC020978.6-201ENST00000571197 3177 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
PCDH1Q08174 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
PCDH1Q08174 RNU6-259P-201ENST00000383999 107 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 SNORA70.8-201ENST00000384231 136 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
PCDH1Q08174 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDH1Q08174 OR6C69P-201ENST00000394268 893 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDH1Q08174 ATP5BP1-201ENST00000411980 1574 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 RPL21P108-201ENST00000413857 481 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 RPS7P13-201ENST00000413955 498 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDH1Q08174 AC017104.2-201ENST00000417000 321 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 AC019050.1-201ENST00000418508 492 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 ELOBP4-201ENST00000423418 296 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.97□□□□□ -1.29
PCDH1Q08174 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDH1Q08174 FAM96AP1-201ENST00000430879 482 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDH1Q08174 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 GTF2F2P2-201ENST00000445825 721 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDH1Q08174 HMGB1P16-201ENST00000447155 540 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 RBMY3AP-201ENST00000449381 1145 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 AL591363.1-201ENST00000450091 483 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 RN7SL308P-201ENST00000464971 297 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 RN7SL160P-201ENST00000468558 284 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDH1Q08174 HMGB1P36-201ENST00000487709 576 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 AP005202.1-201ENST00000489915 867 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDH1Q08174 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDH1Q08174 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDH1Q08174 AC106774.2-201ENST00000510266 406 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 AC016559.1-201ENST00000511420 199 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 TCP11X3P-202ENST00000514289 1254 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 RNU6-506P-201ENST00000516553 94 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 RNU6-1308P-201ENST00000516817 103 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDH1Q08174 AC092709.1-201ENST00000521355 1045 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 AP003033.2-201ENST00000528901 805 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDH1Q08174 PDCL3P1-201ENST00000534575 734 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.97□□□□□ -1.29
PCDH1Q08174 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 ULK4P1-202ENST00000565174 503 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDH1Q08174 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDH1Q08174 OR4K7P-201ENST00000580232 945 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.97□□□□□ -1.29
PCDH1Q08174 AP005137.2-201ENST00000609238 400 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 AC106028.5-201ENST00000610332 395 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 AL589743.7-201ENST00000612637 233 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 MIR6726-201ENST00000613751 61 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 AC126175.1-201ENST00000617041 758 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 AC138932.5-201ENST00000617759 563 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDH1Q08174 AC009120.7-201ENST00000623452 780 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.97□□□□□ -1.29
PCDH1Q08174 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDH1Q08174 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.97□□□□□ -1.29
PCDH1Q08174 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDH1Q08174 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms