Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.02□□□□□ -1.29
RHBDL3P58872 ACA64.4-201ENST00000459070 127 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
RHBDL3P58872 RPSAP37-201ENST00000470913 821 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 RN7SL177P-201ENST00000476596 299 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 AL136038.1-201ENST00000497246 351 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 HAUS1P1-201ENST00000505275 832 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.02□□□□□ -1.29
RHBDL3P58872 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.02□□□□□ -1.29
RHBDL3P58872 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC7.02□□□□□ -1.29
RHBDL3P58872 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.02□□□□□ -1.29
RHBDL3P58872 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC7.02□□□□□ -1.29
RHBDL3P58872 AC109635.6-201ENST00000525487 1113 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.02□□□□□ -1.29
RHBDL3P58872 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RHBDL3P58872 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC7.02□□□□□ -1.29
RHBDL3P58872 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
RHBDL3P58872 GARSP1-201ENST00000570895 719 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC7.02□□□□□ -1.29
RHBDL3P58872 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.02□□□□□ -1.29
RHBDL3P58872 AC104695.2-201ENST00000605056 775 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.02□□□□□ -1.29
RHBDL3P58872 AL163152.1-201ENST00000642001 374 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RHBDL3P58872 AC011504.1-201ENST00000623331 4103 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
RHBDL3P58872 CASC19-281ENST00000642118 1554 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.02□□□□□ -1.29
RHBDL3P58872 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RHBDL3P58872 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
RHBDL3P58872 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RHBDL3P58872 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
RHBDL3P58872 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RHBDL3P58872 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RHBDL3P58872 AC017002.4-201ENST00000604721 1525 ntBASIC7.01□□□□□ -1.29
RHBDL3P58872 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.01□□□□□ -1.29
RHBDL3P58872 AC005225.5-201ENST00000623547 2225 ntBASIC7.01□□□□□ -1.29
RHBDL3P58872 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.01□□□□□ -1.29
RHBDL3P58872 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RHBDL3P58872 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RHBDL3P58872 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
RHBDL3P58872 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RHBDL3P58872 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
RHBDL3P58872 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.01□□□□□ -1.29
RHBDL3P58872 SPATA2P1-201ENST00000431223 2055 ntBASIC7.01□□□□□ -1.29
RHBDL3P58872 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RHBDL3P58872 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
RHBDL3P58872 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RHBDL3P58872 RNA5SP46-201ENST00000362370 120 ntBASIC7.01□□□□□ -1.29
RHBDL3P58872 AC104297.1-201ENST00000393779 870 ntBASIC7.01□□□□□ -1.29
RHBDL3P58872 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
RHBDL3P58872 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC7.01□□□□□ -1.29
RHBDL3P58872 AL596448.1-201ENST00000415024 392 ntBASIC7.01□□□□□ -1.29
RHBDL3P58872 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.01□□□□□ -1.29
RHBDL3P58872 BX510359.3-201ENST00000422168 306 ntBASIC7.01□□□□□ -1.29
RHBDL3P58872 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.01□□□□□ -1.29
RHBDL3P58872 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC7.01□□□□□ -1.29
RHBDL3P58872 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.01□□□□□ -1.29
RHBDL3P58872 AC073909.1-201ENST00000447112 999 ntBASIC7.01□□□□□ -1.29
RHBDL3P58872 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.01□□□□□ -1.29
RHBDL3P58872 RPL7L1P4-201ENST00000513004 707 ntBASIC7.01□□□□□ -1.29
RHBDL3P58872 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.01□□□□□ -1.29
RHBDL3P58872 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.01□□□□□ -1.29
RHBDL3P58872 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.01□□□□□ -1.29
RHBDL3P58872 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC7.01□□□□□ -1.29
RHBDL3P58872 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.01□□□□□ -1.29
RHBDL3P58872 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC7.01□□□□□ -1.29
RHBDL3P58872 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.01□□□□□ -1.29
RHBDL3P58872 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.01□□□□□ -1.29
RHBDL3P58872 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.01□□□□□ -1.29
RHBDL3P58872 AC004890.3-201ENST00000605566 1095 ntBASIC7.01□□□□□ -1.29
RHBDL3P58872 AC004836.1-201ENST00000623032 634 ntBASIC7.01□□□□□ -1.29
RHBDL3P58872 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.01□□□□□ -1.29
RHBDL3P58872 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
RHBDL3P58872 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC7.01□□□□□ -1.29
RHBDL3P58872 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
RHBDL3P58872 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.01□□□□□ -1.29
RHBDL3P58872 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.01□□□□□ -1.29
RHBDL3P58872 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
RHBDL3P58872 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
RHBDL3P58872 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RHBDL3P58872 DOCK11P1-201ENST00000553480 5932 ntBASIC7□□□□□ -1.29
RHBDL3P58872 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
RHBDL3P58872 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RHBDL3P58872 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7□□□□□ -1.29
RHBDL3P58872 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
RHBDL3P58872 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7□□□□□ -1.29
RHBDL3P58872 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7□□□□□ -1.29
RHBDL3P58872 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7□□□□□ -1.29
RHBDL3P58872 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
RHBDL3P58872 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RHBDL3P58872 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7□□□□□ -1.29
RHBDL3P58872 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC7□□□□□ -1.29
RHBDL3P58872 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RHBDL3P58872 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RHBDL3P58872 HMGB3P24-201ENST00000433260 622 ntBASIC7□□□□□ -1.29
RHBDL3P58872 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC7□□□□□ -1.29
RHBDL3P58872 GAPDHP48-201ENST00000436626 961 ntBASIC7□□□□□ -1.29
RHBDL3P58872 AC245517.2-201ENST00000442890 346 ntBASIC7□□□□□ -1.29
RHBDL3P58872 CYCSP51-201ENST00000443545 318 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms