Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VSX2P58304 AC093671.1-201ENST00000624981 2929 ntBASIC5.47□□□□□ -1.53
VSX2P58304 KYNUP3-201ENST00000574386 1341 ntBASIC5.47□□□□□ -1.53
VSX2P58304 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
VSX2P58304 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VSX2P58304 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.46□□□□□ -1.53
VSX2P58304 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
VSX2P58304 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
VSX2P58304 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.46□□□□□ -1.53
VSX2P58304 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VSX2P58304 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
VSX2P58304 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VSX2P58304 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VSX2P58304 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.46□□□□□ -1.54
VSX2P58304 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
VSX2P58304 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VSX2P58304 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.46□□□□□ -1.54
VSX2P58304 NPM1P37-201ENST00000403105 874 ntBASIC5.46□□□□□ -1.54
VSX2P58304 RN7SKP17-201ENST00000411242 351 ntBASIC5.46□□□□□ -1.54
VSX2P58304 SDHDP6-201ENST00000414693 480 ntBASIC5.46□□□□□ -1.54
VSX2P58304 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.46□□□□□ -1.54
VSX2P58304 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.46□□□□□ -1.54
VSX2P58304 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.46□□□□□ -1.54
VSX2P58304 CRIP1P1-201ENST00000427567 185 ntBASIC5.46□□□□□ -1.54
VSX2P58304 USP24P1-201ENST00000433802 779 ntBASIC5.46□□□□□ -1.54
VSX2P58304 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.46□□□□□ -1.54
VSX2P58304 AC002504.1-201ENST00000438281 691 ntBASIC5.46□□□□□ -1.54
VSX2P58304 MEMO1P4-201ENST00000453590 386 ntBASIC5.46□□□□□ -1.54
VSX2P58304 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.46□□□□□ -1.54
VSX2P58304 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
VSX2P58304 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.46□□□□□ -1.54
VSX2P58304 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VSX2P58304 RN7SL174P-201ENST00000475578 289 ntBASIC5.46□□□□□ -1.54
VSX2P58304 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.46□□□□□ -1.54
VSX2P58304 RN7SL273P-201ENST00000481561 299 ntBASIC5.46□□□□□ -1.54
VSX2P58304 DUTP1-201ENST00000493631 470 ntBASIC5.46□□□□□ -1.54
VSX2P58304 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.46□□□□□ -1.54
VSX2P58304 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.46□□□□□ -1.54
VSX2P58304 MRPS16P1-201ENST00000523462 412 ntBASIC5.46□□□□□ -1.54
VSX2P58304 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.46□□□□□ -1.54
VSX2P58304 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.46□□□□□ -1.54
VSX2P58304 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.46□□□□□ -1.54
VSX2P58304 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.46□□□□□ -1.54
VSX2P58304 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.46□□□□□ -1.54
VSX2P58304 AP001357.1-201ENST00000586304 1053 ntBASIC5.46□□□□□ -1.54
VSX2P58304 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.46□□□□□ -1.54
VSX2P58304 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.46□□□□□ -1.54
VSX2P58304 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
VSX2P58304 AC063977.5-201ENST00000601044 974 ntBASIC5.46□□□□□ -1.54
VSX2P58304 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.46□□□□□ -1.54
VSX2P58304 AL133481.2-203ENST00000607558 139 ntBASIC5.46□□□□□ -1.54
VSX2P58304 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.46□□□□□ -1.54
VSX2P58304 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VSX2P58304 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
VSX2P58304 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.46□□□□□ -1.54
VSX2P58304 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VSX2P58304 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VSX2P58304 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
VSX2P58304 SRRM1P3-201ENST00000426911 2678 ntBASIC5.46□□□□□ -1.54
VSX2P58304 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
VSX2P58304 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.46□□□□□ -1.54
VSX2P58304 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.46□□□□□ -1.54
VSX2P58304 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VSX2P58304 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VSX2P58304 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VSX2P58304 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VSX2P58304 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VSX2P58304 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VSX2P58304 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VSX2P58304 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VSX2P58304 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
VSX2P58304 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
VSX2P58304 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.45□□□□□ -1.54
VSX2P58304 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.45□□□□□ -1.54
VSX2P58304 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.45□□□□□ -1.54
VSX2P58304 MIR323A-201ENST00000362199 86 ntBASIC5.45□□□□□ -1.54
VSX2P58304 RNA5SP46-201ENST00000362370 120 ntBASIC5.45□□□□□ -1.54
VSX2P58304 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.45□□□□□ -1.54
VSX2P58304 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.45□□□□□ -1.54
VSX2P58304 RN7SKP206-201ENST00000410823 293 ntBASIC5.45□□□□□ -1.54
VSX2P58304 RPS6P23-201ENST00000413224 722 ntBASIC5.45□□□□□ -1.54
VSX2P58304 RPL12P16-201ENST00000431098 498 ntBASIC5.45□□□□□ -1.54
VSX2P58304 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.45□□□□□ -1.54
VSX2P58304 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.45□□□□□ -1.54
VSX2P58304 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.45□□□□□ -1.54
VSX2P58304 Z84478.1-201ENST00000438230 1219 ntBASIC5.45□□□□□ -1.54
VSX2P58304 AC005297.1-201ENST00000444765 862 ntBASIC5.45□□□□□ -1.54
VSX2P58304 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VSX2P58304 RSU1P1-201ENST00000453416 441 ntBASIC5.45□□□□□ -1.54
VSX2P58304 AC087672.1-201ENST00000479876 766 ntBASIC5.45□□□□□ -1.54
VSX2P58304 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.45□□□□□ -1.54
VSX2P58304 AC026782.2-201ENST00000510845 636 ntBASIC5.45□□□□□ -1.54
VSX2P58304 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.45□□□□□ -1.54
VSX2P58304 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.45□□□□□ -1.54
VSX2P58304 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.45□□□□□ -1.54
VSX2P58304 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.45□□□□□ -1.54
VSX2P58304 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.45□□□□□ -1.54
VSX2P58304 MIR4505-201ENST00000582238 73 ntBASIC5.45□□□□□ -1.54
VSX2P58304 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.45□□□□□ -1.54
VSX2P58304 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms