Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC7.34□□□□□ -1.23
RIPK4P57078 AC132068.1-201ENST00000623805 459 ntBASIC7.34□□□□□ -1.23
RIPK4P57078 AC069542.2-201ENST00000624816 216 ntBASIC7.34□□□□□ -1.23
RIPK4P57078 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.34□□□□□ -1.23
RIPK4P57078 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.34□□□□□ -1.23
RIPK4P57078 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
RIPK4P57078 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RIPK4P57078 AC007998.4-201ENST00000612496 2533 ntBASIC7.34□□□□□ -1.23
RIPK4P57078 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RIPK4P57078 AC104964.3-201ENST00000606115 2860 ntBASIC7.34□□□□□ -1.24
RIPK4P57078 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RIPK4P57078 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RIPK4P57078 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
RIPK4P57078 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
RIPK4P57078 AP000473.2-201ENST00000602659 1537 ntBASIC7.33□□□□□ -1.24
RIPK4P57078 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RIPK4P57078 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.33□□□□□ -1.24
RIPK4P57078 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RIPK4P57078 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC7.33□□□□□ -1.24
RIPK4P57078 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC7.33□□□□□ -1.24
RIPK4P57078 AL121886.1-201ENST00000358609 435 ntBASIC7.33□□□□□ -1.24
RIPK4P57078 MIR323B-201ENST00000385269 82 ntBASIC7.33□□□□□ -1.24
RIPK4P57078 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.33□□□□□ -1.24
RIPK4P57078 MRPS21P2-201ENST00000424704 264 ntBASIC7.33□□□□□ -1.24
RIPK4P57078 TMEM183AP1-205ENST00000432739 290 ntBASIC7.33□□□□□ -1.24
RIPK4P57078 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.33□□□□□ -1.24
RIPK4P57078 AC093719.1-201ENST00000480427 441 ntBASIC7.33□□□□□ -1.24
RIPK4P57078 AC090058.1-201ENST00000498788 435 ntBASIC7.33□□□□□ -1.24
RIPK4P57078 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.33□□□□□ -1.24
RIPK4P57078 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.33□□□□□ -1.24
RIPK4P57078 IGHVIII-76-1-201ENST00000523776 286 ntBASIC7.33□□□□□ -1.24
RIPK4P57078 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.33□□□□□ -1.24
RIPK4P57078 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.33□□□□□ -1.24
RIPK4P57078 MIR6886-201ENST00000619864 61 ntBASIC7.33□□□□□ -1.24
RIPK4P57078 AL162456.1-201ENST00000634535 2006 ntBASIC7.33□□□□□ -1.24
RIPK4P57078 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
RIPK4P57078 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RIPK4P57078 UGT2B24P-201ENST00000514441 1597 ntBASIC7.33□□□□□ -1.24
RIPK4P57078 AC097634.1-201ENST00000604491 2467 ntBASIC7.33□□□□□ -1.24
RIPK4P57078 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
RIPK4P57078 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.32□□□□□ -1.24
RIPK4P57078 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC7.32□□□□□ -1.24
RIPK4P57078 AC239868.2-201ENST00000564237 4527 ntBASIC7.32□□□□□ -1.24
RIPK4P57078 SNORA51.1-201ENST00000363243 140 ntBASIC7.32□□□□□ -1.24
RIPK4P57078 RNA5SP132-201ENST00000364725 118 ntBASIC7.32□□□□□ -1.24
RIPK4P57078 AC007161.1-204ENST00000423039 460 ntBASIC7.32□□□□□ -1.24
RIPK4P57078 AL590399.4-201ENST00000436561 601 ntBASIC7.32□□□□□ -1.24
RIPK4P57078 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC7.32□□□□□ -1.24
RIPK4P57078 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.32□□□□□ -1.24
RIPK4P57078 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC7.32□□□□□ -1.24
RIPK4P57078 GAPDHP62-201ENST00000515313 990 ntBASIC7.32□□□□□ -1.24
RIPK4P57078 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RIPK4P57078 NPM1P5-201ENST00000557228 838 ntBASIC7.32□□□□□ -1.24
RIPK4P57078 AC015720.2-201ENST00000567709 334 ntBASIC7.32□□□□□ -1.24
RIPK4P57078 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.32□□□□□ -1.24
RIPK4P57078 AC012616.1-201ENST00000600294 197 ntBASIC7.32□□□□□ -1.24
RIPK4P57078 PACRG-210ENST00000611387 279 ntTSL 5 BASIC7.32□□□□□ -1.24
RIPK4P57078 AL359513.1-201ENST00000614364 557 ntBASIC7.32□□□□□ -1.24
RIPK4P57078 AC009120.7-201ENST00000623452 780 ntBASIC7.32□□□□□ -1.24
RIPK4P57078 LINC01963-201ENST00000562038 3148 ntBASIC7.32□□□□□ -1.24
RIPK4P57078 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.32□□□□□ -1.24
RIPK4P57078 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RIPK4P57078 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
RIPK4P57078 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RIPK4P57078 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RIPK4P57078 HSPD1P7-201ENST00000447985 1686 ntBASIC7.32□□□□□ -1.24
RIPK4P57078 AC018809.2-201ENST00000602436 3823 ntBASIC7.31□□□□□ -1.24
RIPK4P57078 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC7.31□□□□□ -1.24
RIPK4P57078 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RIPK4P57078 AL137141.1-201ENST00000624622 4836 ntBASIC7.31□□□□□ -1.24
RIPK4P57078 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RIPK4P57078 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RIPK4P57078 RNA5SP234-201ENST00000363916 119 ntBASIC7.31□□□□□ -1.24
RIPK4P57078 MIR143-201ENST00000385300 106 ntBASIC7.31□□□□□ -1.24
RIPK4P57078 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
RIPK4P57078 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RIPK4P57078 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC7.31□□□□□ -1.24
RIPK4P57078 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.31□□□□□ -1.24
RIPK4P57078 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7.31□□□□□ -1.24
RIPK4P57078 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.31□□□□□ -1.24
RIPK4P57078 RN7SL184P-201ENST00000488308 297 ntBASIC7.31□□□□□ -1.24
RIPK4P57078 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.31□□□□□ -1.24
RIPK4P57078 RPL7L1P4-201ENST00000513004 707 ntBASIC7.31□□□□□ -1.24
RIPK4P57078 PMS2P3-207ENST00000529061 717 ntBASIC7.31□□□□□ -1.24
RIPK4P57078 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RIPK4P57078 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.31□□□□□ -1.24
RIPK4P57078 AC010245.2-201ENST00000606908 1167 ntBASIC7.31□□□□□ -1.24
RIPK4P57078 MIR6768-201ENST00000610734 72 ntBASIC7.31□□□□□ -1.24
RIPK4P57078 AC007204.2-201ENST00000615022 616 ntBASIC7.31□□□□□ -1.24
RIPK4P57078 AL118522.2-201ENST00000616045 615 ntBASIC7.31□□□□□ -1.24
RIPK4P57078 AC063952.1-203ENST00000634410 658 ntBASIC7.31□□□□□ -1.24
RIPK4P57078 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RIPK4P57078 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC7.31□□□□□ -1.24
RIPK4P57078 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RIPK4P57078 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RIPK4P57078 BX284613.1-201ENST00000452221 1641 ntBASIC7.3□□□□□ -1.24
RIPK4P57078 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
RIPK4P57078 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RIPK4P57078 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RIPK4P57078 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms