Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
CLDN20P56880 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLDN20P56880 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLDN20P56880 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.44□□□□□ -1.54
CLDN20P56880 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
CLDN20P56880 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
CLDN20P56880 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CLDN20P56880 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN20P56880 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN20P56880 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.43□□□□□ -1.54
CLDN20P56880 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN20P56880 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN20P56880 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN20P56880 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN20P56880 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CLDN20P56880 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN20P56880 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CLDN20P56880 RN7SKP81-201ENST00000365603 331 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 CCNB2P1-201ENST00000399411 1150 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CLDN20P56880 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.43□□□□□ -1.54
CLDN20P56880 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN20P56880 AC066692.1-201ENST00000421721 457 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 KCTD9P1-201ENST00000430462 1167 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 ARL5AP3-201ENST00000439327 386 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.43□□□□□ -1.54
CLDN20P56880 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.43□□□□□ -1.54
CLDN20P56880 EIF5AP4-201ENST00000441206 465 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN20P56880 AL445466.1-201ENST00000448432 357 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 RPL23AP60-201ENST00000450011 454 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 CFL1P4-201ENST00000451536 498 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.43□□□□□ -1.54
CLDN20P56880 RAB28P2-201ENST00000454299 641 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN20P56880 MTND2P39-201ENST00000457230 764 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 RN7SL352P-201ENST00000466002 277 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.43□□□□□ -1.54
CLDN20P56880 AC108157.1-201ENST00000510511 539 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.43□□□□□ -1.54
CLDN20P56880 RNU6-491P-201ENST00000516099 110 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.43□□□□□ -1.54
CLDN20P56880 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.43□□□□□ -1.54
CLDN20P56880 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.43□□□□□ -1.54
CLDN20P56880 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CLDN20P56880 OR4R2P-201ENST00000530815 597 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.43□□□□□ -1.54
CLDN20P56880 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.43□□□□□ -1.54
CLDN20P56880 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.43□□□□□ -1.54
CLDN20P56880 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.43□□□□□ -1.54
CLDN20P56880 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.43□□□□□ -1.54
CLDN20P56880 NDUFA5P11-201ENST00000567995 343 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.43□□□□□ -1.54
CLDN20P56880 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.43□□□□□ -1.54
CLDN20P56880 AC067773.1-201ENST00000603284 1094 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 AC108673.3-201ENST00000609183 335 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 AL512506.1-201ENST00000613918 449 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CLDN20P56880 AC074276.2-201ENST00000619891 348 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.43□□□□□ -1.54
CLDN20P56880 AC021766.1-201ENST00000624404 741 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 AC004076.2-201ENST00000620532 3323 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.43□□□□□ -1.54
CLDN20P56880 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN20P56880 AC120036.2-201ENST00000509729 1474 ntBASIC5.43□□□□□ -1.54
CLDN20P56880 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN20P56880 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN20P56880 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN20P56880 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CLDN20P56880 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN20P56880 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN20P56880 AL512283.1-201ENST00000606756 1384 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN20P56880 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN20P56880 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN20P56880 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN20P56880 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.42□□□□□ -1.54
CLDN20P56880 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN20P56880 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN20P56880 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.42□□□□□ -1.54
CLDN20P56880 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CLDN20P56880 TMSB4XP2-201ENST00000335179 210 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 RNA5SP477-201ENST00000362639 119 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 SNORA5.1-201ENST00000384275 131 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 SNRPEP6-201ENST00000407465 277 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 AC017078.1-201ENST00000416146 368 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.42□□□□□ -1.54
CLDN20P56880 AL357078.2-201ENST00000416486 427 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.42□□□□□ -1.54
CLDN20P56880 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN20P56880 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.42□□□□□ -1.54
CLDN20P56880 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN20P56880 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.42□□□□□ -1.54
CLDN20P56880 RPS27AP6-201ENST00000427962 448 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.42□□□□□ -1.54
CLDN20P56880 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN20P56880 RPS10P18-201ENST00000442662 495 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 MTND2P25-201ENST00000449028 610 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 RPL31P20-201ENST00000449593 360 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms