Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
LIM2P55344 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LIM2P55344 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LIM2P55344 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LIM2P55344 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
LIM2P55344 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
LIM2P55344 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
LIM2P55344 AL592429.1-201ENST00000403909 1473 ntBASIC5.32□□□□□ -1.56
LIM2P55344 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LIM2P55344 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LIM2P55344 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
LIM2P55344 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LIM2P55344 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LIM2P55344 GAPDHP24-201ENST00000328713 983 ntBASIC5.32□□□□□ -1.56
LIM2P55344 AL121886.1-201ENST00000358609 435 ntBASIC5.32□□□□□ -1.56
LIM2P55344 RNA5SP46-201ENST00000362370 120 ntBASIC5.32□□□□□ -1.56
LIM2P55344 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
LIM2P55344 AL031985.1-201ENST00000392713 418 ntBASIC5.32□□□□□ -1.56
LIM2P55344 SNORA81-201ENST00000408493 178 ntBASIC5.32□□□□□ -1.56
LIM2P55344 OR2AT2P-201ENST00000413438 905 ntBASIC5.32□□□□□ -1.56
LIM2P55344 OR10T1P-201ENST00000424327 947 ntBASIC5.32□□□□□ -1.56
LIM2P55344 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.32□□□□□ -1.56
LIM2P55344 RPL5P2-201ENST00000429598 854 ntBASIC5.32□□□□□ -1.56
LIM2P55344 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.32□□□□□ -1.56
LIM2P55344 AC006335.2-201ENST00000437993 330 ntBASIC5.32□□□□□ -1.56
LIM2P55344 Z84478.1-201ENST00000438230 1219 ntBASIC5.32□□□□□ -1.56
LIM2P55344 MED28P3-201ENST00000444288 531 ntBASIC5.32□□□□□ -1.56
LIM2P55344 EEF1B2P6-201ENST00000445713 673 ntBASIC5.32□□□□□ -1.56
LIM2P55344 HMGN1P36-201ENST00000446623 298 ntBASIC5.32□□□□□ -1.56
LIM2P55344 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LIM2P55344 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.32□□□□□ -1.56
LIM2P55344 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.32□□□□□ -1.56
LIM2P55344 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.32□□□□□ -1.56
LIM2P55344 AC112191.2-201ENST00000522428 333 ntBASIC5.32□□□□□ -1.56
LIM2P55344 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.32□□□□□ -1.56
LIM2P55344 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.32□□□□□ -1.56
LIM2P55344 AC010547.6-201ENST00000571789 193 ntBASIC5.32□□□□□ -1.56
LIM2P55344 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.32□□□□□ -1.56
LIM2P55344 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.32□□□□□ -1.56
LIM2P55344 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.32□□□□□ -1.56
LIM2P55344 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.32□□□□□ -1.56
LIM2P55344 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.32□□□□□ -1.56
LIM2P55344 AC127024.6-201ENST00000621598 424 ntBASIC5.32□□□□□ -1.56
LIM2P55344 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.32□□□□□ -1.56
LIM2P55344 YES1P1-201ENST00000418510 1628 ntBASIC5.32□□□□□ -1.56
LIM2P55344 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LIM2P55344 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LIM2P55344 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.32□□□□□ -1.56
LIM2P55344 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LIM2P55344 AL161912.4-201ENST00000623889 2468 ntBASIC5.32□□□□□ -1.56
LIM2P55344 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.32□□□□□ -1.56
LIM2P55344 ADAM24P-201ENST00000398655 2101 ntBASIC5.32□□□□□ -1.56
LIM2P55344 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LIM2P55344 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LIM2P55344 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LIM2P55344 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.31□□□□□ -1.56
LIM2P55344 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LIM2P55344 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LIM2P55344 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LIM2P55344 HSPD1P7-201ENST00000447985 1686 ntBASIC5.31□□□□□ -1.56
LIM2P55344 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LIM2P55344 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LIM2P55344 AC104964.3-201ENST00000606115 2860 ntBASIC5.31□□□□□ -1.56
LIM2P55344 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
LIM2P55344 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
LIM2P55344 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.31□□□□□ -1.56
LIM2P55344 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.31□□□□□ -1.56
LIM2P55344 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LIM2P55344 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LIM2P55344 TMSB4XP4-201ENST00000323496 618 ntBASIC5.31□□□□□ -1.56
LIM2P55344 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.31□□□□□ -1.56
LIM2P55344 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.31□□□□□ -1.56
LIM2P55344 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LIM2P55344 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.31□□□□□ -1.56
LIM2P55344 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LIM2P55344 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LIM2P55344 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
LIM2P55344 CDY17P-201ENST00000414121 1282 ntBASIC5.31□□□□□ -1.56
LIM2P55344 SDHDP6-201ENST00000414693 480 ntBASIC5.31□□□□□ -1.56
LIM2P55344 RANP7-201ENST00000418085 644 ntBASIC5.31□□□□□ -1.56
LIM2P55344 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.31□□□□□ -1.56
LIM2P55344 AC002504.1-201ENST00000438281 691 ntBASIC5.31□□□□□ -1.56
LIM2P55344 NANOGP9-201ENST00000439890 892 ntBASIC5.31□□□□□ -1.56
LIM2P55344 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.31□□□□□ -1.56
LIM2P55344 AL450996.1-201ENST00000445574 1202 ntBASIC5.31□□□□□ -1.56
LIM2P55344 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.31□□□□□ -1.56
LIM2P55344 AP000547.1-201ENST00000454360 617 ntBASIC5.31□□□□□ -1.56
LIM2P55344 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LIM2P55344 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LIM2P55344 AC138866.2-201ENST00000508650 584 ntBASIC5.31□□□□□ -1.56
LIM2P55344 RN7SKP253-201ENST00000516424 309 ntBASIC5.31□□□□□ -1.56
LIM2P55344 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.31□□□□□ -1.56
LIM2P55344 PMS2P3-207ENST00000529061 717 ntBASIC5.31□□□□□ -1.56
LIM2P55344 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.31□□□□□ -1.56
LIM2P55344 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.31□□□□□ -1.56
LIM2P55344 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.31□□□□□ -1.56
LIM2P55344 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.31□□□□□ -1.56
LIM2P55344 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.31□□□□□ -1.56
LIM2P55344 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.31□□□□□ -1.56
LIM2P55344 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms