Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AL138899.2-201ENST00000439139 499 ntBASIC5.84□□□□□ -1.47
CDH6P55285 AL445665.1-202ENST00000452436 324 ntBASIC5.84□□□□□ -1.47
CDH6P55285 RPS3AP15-201ENST00000483874 781 ntBASIC5.84□□□□□ -1.47
CDH6P55285 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH6P55285 AC122688.1-201ENST00000541494 223 ntBASIC5.84□□□□□ -1.47
CDH6P55285 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH6P55285 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.84□□□□□ -1.47
CDH6P55285 AP001496.3-201ENST00000580230 913 ntBASIC5.84□□□□□ -1.47
CDH6P55285 AL139041.1-201ENST00000605480 610 ntBASIC5.84□□□□□ -1.47
CDH6P55285 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH6P55285 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH6P55285 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH6P55285 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH6P55285 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH6P55285 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CDH6P55285 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH6P55285 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH6P55285 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH6P55285 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH6P55285 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH6P55285 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH6P55285 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CDH6P55285 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.48
CDH6P55285 AL592429.1-201ENST00000403909 1473 ntBASIC5.83□□□□□ -1.48
CDH6P55285 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CDH6P55285 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH6P55285 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH6P55285 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH6P55285 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH6P55285 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH6P55285 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH6P55285 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH6P55285 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH6P55285 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH6P55285 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH6P55285 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CDH6P55285 HMGB1P20-201ENST00000402555 677 ntBASIC5.83□□□□□ -1.48
CDH6P55285 LYPLA1P3-201ENST00000402650 695 ntBASIC5.83□□□□□ -1.48
CDH6P55285 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH6P55285 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH6P55285 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH6P55285 RPS10P18-201ENST00000442662 495 ntBASIC5.83□□□□□ -1.48
CDH6P55285 LINC02210-201ENST00000444561 288 ntBASIC5.83□□□□□ -1.48
CDH6P55285 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH6P55285 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH6P55285 AC087672.1-201ENST00000479876 766 ntBASIC5.83□□□□□ -1.48
CDH6P55285 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.83□□□□□ -1.48
CDH6P55285 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH6P55285 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH6P55285 MRPS16P1-201ENST00000523462 412 ntBASIC5.83□□□□□ -1.48
CDH6P55285 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH6P55285 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH6P55285 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH6P55285 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH6P55285 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH6P55285 AP005431.1-201ENST00000618479 319 ntBASIC5.83□□□□□ -1.48
CDH6P55285 AP001153.1-201ENST00000641024 338 ntBASIC5.83□□□□□ -1.48
CDH6P55285 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH6P55285 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH6P55285 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH6P55285 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH6P55285 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
CDH6P55285 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.83□□□□□ -1.48
CDH6P55285 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CDH6P55285 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH6P55285 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CDH6P55285 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CDH6P55285 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CDH6P55285 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CDH6P55285 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CDH6P55285 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH6P55285 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH6P55285 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH6P55285 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CDH6P55285 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH6P55285 TRAV35-201ENST00000390462 330 ntBASIC5.82□□□□□ -1.48
CDH6P55285 OOSP1-201ENST00000398992 1270 ntBASIC5.82□□□□□ -1.48
CDH6P55285 EEF1B2P8-201ENST00000414101 671 ntBASIC5.82□□□□□ -1.48
CDH6P55285 AL158827.1-201ENST00000416300 391 ntBASIC5.82□□□□□ -1.48
CDH6P55285 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH6P55285 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH6P55285 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH6P55285 BX276092.6-201ENST00000430476 250 ntBASIC5.82□□□□□ -1.48
CDH6P55285 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH6P55285 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH6P55285 AC006335.2-201ENST00000437993 330 ntBASIC5.82□□□□□ -1.48
CDH6P55285 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH6P55285 AL596266.1-201ENST00000448132 400 ntBASIC5.82□□□□□ -1.48
CDH6P55285 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH6P55285 BX276092.8-201ENST00000455722 250 ntBASIC5.82□□□□□ -1.48
CDH6P55285 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH6P55285 AC084754.1-201ENST00000463466 464 ntBASIC5.82□□□□□ -1.48
CDH6P55285 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH6P55285 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.82□□□□□ -1.48
CDH6P55285 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH6P55285 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH6P55285 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH6P55285 AL359742.1-201ENST00000622497 540 ntBASIC5.82□□□□□ -1.48
CDH6P55285 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH6P55285 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms