Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
GPC3P51654 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.34□□□□□ -1.39
GPC3P51654 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.34□□□□□ -1.39
GPC3P51654 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
GPC3P51654 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.34□□□□□ -1.39
GPC3P51654 AC090022.1-201ENST00000546569 311 ntBASIC6.34□□□□□ -1.39
GPC3P51654 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.34□□□□□ -1.39
GPC3P51654 AL049872.1-201ENST00000556323 322 ntBASIC6.34□□□□□ -1.39
GPC3P51654 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
GPC3P51654 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
GPC3P51654 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.34□□□□□ -1.39
GPC3P51654 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.34□□□□□ -1.39
GPC3P51654 AP001267.4-201ENST00000602598 545 ntBASIC6.34□□□□□ -1.39
GPC3P51654 AC008115.3-201ENST00000614874 549 ntBASIC6.34□□□□□ -1.39
GPC3P51654 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
GPC3P51654 YES1P1-201ENST00000418510 1628 ntBASIC6.34□□□□□ -1.39
GPC3P51654 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
GPC3P51654 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
GPC3P51654 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.34□□□□□ -1.39
GPC3P51654 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
GPC3P51654 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
GPC3P51654 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
GPC3P51654 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
GPC3P51654 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
GPC3P51654 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
GPC3P51654 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GPC3P51654 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GPC3P51654 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GPC3P51654 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GPC3P51654 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GPC3P51654 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
GPC3P51654 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
GPC3P51654 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.33□□□□□ -1.4
GPC3P51654 AL391422.1-201ENST00000402155 436 ntBASIC6.33□□□□□ -1.4
GPC3P51654 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.33□□□□□ -1.4
GPC3P51654 AL391361.1-201ENST00000405580 489 ntBASIC6.33□□□□□ -1.4
GPC3P51654 SNORA81-201ENST00000408493 178 ntBASIC6.33□□□□□ -1.4
GPC3P51654 DPPA2P2-201ENST00000418220 897 ntBASIC6.33□□□□□ -1.4
GPC3P51654 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.33□□□□□ -1.4
GPC3P51654 NPM1P48-201ENST00000436002 853 ntBASIC6.33□□□□□ -1.4
GPC3P51654 FMO7P-201ENST00000436045 768 ntBASIC6.33□□□□□ -1.4
GPC3P51654 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.33□□□□□ -1.4
GPC3P51654 RSU1P1-201ENST00000453416 441 ntBASIC6.33□□□□□ -1.4
GPC3P51654 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.33□□□□□ -1.4
GPC3P51654 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GPC3P51654 AC079080.1-201ENST00000479841 822 ntBASIC6.33□□□□□ -1.4
GPC3P51654 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.33□□□□□ -1.4
GPC3P51654 RN7SL570P-201ENST00000484405 292 ntBASIC6.33□□□□□ -1.4
GPC3P51654 AC012123.2-201ENST00000485809 248 ntBASIC6.33□□□□□ -1.4
GPC3P51654 AC073610.1-201ENST00000489971 396 ntBASIC6.33□□□□□ -1.4
GPC3P51654 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.33□□□□□ -1.4
GPC3P51654 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.33□□□□□ -1.4
GPC3P51654 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.33□□□□□ -1.4
GPC3P51654 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.33□□□□□ -1.4
GPC3P51654 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.33□□□□□ -1.4
GPC3P51654 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.33□□□□□ -1.4
GPC3P51654 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.33□□□□□ -1.4
GPC3P51654 AC007225.2-201ENST00000562529 256 ntBASIC6.33□□□□□ -1.4
GPC3P51654 MIR1273E-201ENST00000581165 102 ntBASIC6.33□□□□□ -1.4
GPC3P51654 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.33□□□□□ -1.4
GPC3P51654 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GPC3P51654 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.33□□□□□ -1.4
GPC3P51654 AP003072.5-201ENST00000623872 773 ntBASIC6.33□□□□□ -1.4
GPC3P51654 AC007683.2-201ENST00000624681 714 ntBASIC6.33□□□□□ -1.4
GPC3P51654 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GPC3P51654 LINC02019-201ENST00000608605 2060 ntBASIC6.33□□□□□ -1.4
GPC3P51654 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
GPC3P51654 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GPC3P51654 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GPC3P51654 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
GPC3P51654 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GPC3P51654 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GPC3P51654 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GPC3P51654 AL355834.1-201ENST00000556602 3965 ntBASIC6.33□□□□□ -1.4
GPC3P51654 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
GPC3P51654 CASC19-255ENST00000641733 1385 ntBASIC6.32□□□□□ -1.4
GPC3P51654 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
GPC3P51654 HCFC2P1-201ENST00000392864 1592 ntBASIC6.32□□□□□ -1.4
GPC3P51654 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
GPC3P51654 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.32□□□□□ -1.4
GPC3P51654 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
GPC3P51654 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
GPC3P51654 RN7SKP160-201ENST00000363804 340 ntBASIC6.32□□□□□ -1.4
GPC3P51654 RNA5SP131-201ENST00000365452 119 ntBASIC6.32□□□□□ -1.4
GPC3P51654 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
GPC3P51654 RMRPP5-201ENST00000411156 267 ntBASIC6.32□□□□□ -1.4
GPC3P51654 SMC4P1-201ENST00000414479 527 ntBASIC6.32□□□□□ -1.4
GPC3P51654 AC010740.1-201ENST00000417035 684 ntBASIC6.32□□□□□ -1.4
GPC3P51654 NIFKP3-201ENST00000417799 865 ntBASIC6.32□□□□□ -1.4
GPC3P51654 TNPO1P1-201ENST00000423641 1138 ntBASIC6.32□□□□□ -1.4
GPC3P51654 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.32□□□□□ -1.4
GPC3P51654 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.32□□□□□ -1.4
GPC3P51654 AC113412.1-201ENST00000425840 504 ntBASIC6.32□□□□□ -1.4
GPC3P51654 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.32□□□□□ -1.4
GPC3P51654 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.32□□□□□ -1.4
GPC3P51654 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.32□□□□□ -1.4
GPC3P51654 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.32□□□□□ -1.4
GPC3P51654 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.32□□□□□ -1.4
GPC3P51654 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.32□□□□□ -1.4
GPC3P51654 RN7SL177P-201ENST00000476596 299 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms