Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MT-RNR2-201ENST00000387347 1559 ntBASIC6.54□□□□□ -1.36
NEDD4P46934 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NEDD4P46934 RN7SKP206-201ENST00000410823 293 ntBASIC6.54□□□□□ -1.36
NEDD4P46934 RNF10P1-201ENST00000418589 369 ntBASIC6.54□□□□□ -1.36
NEDD4P46934 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NEDD4P46934 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.54□□□□□ -1.36
NEDD4P46934 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
NEDD4P46934 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.54□□□□□ -1.36
NEDD4P46934 AC093815.1-201ENST00000508637 280 ntBASIC6.54□□□□□ -1.36
NEDD4P46934 OR5AM1P-201ENST00000532136 1032 ntBASIC6.54□□□□□ -1.36
NEDD4P46934 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.54□□□□□ -1.36
NEDD4P46934 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NEDD4P46934 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.54□□□□□ -1.36
NEDD4P46934 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.54□□□□□ -1.36
NEDD4P46934 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.54□□□□□ -1.36
NEDD4P46934 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.54□□□□□ -1.36
NEDD4P46934 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.54□□□□□ -1.36
NEDD4P46934 AC109446.4-201ENST00000623235 2755 ntBASIC6.54□□□□□ -1.36
NEDD4P46934 AL691477.1-201ENST00000624398 162 ntBASIC6.54□□□□□ -1.36
NEDD4P46934 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NEDD4P46934 ABCA11P-202ENST00000504019 2110 ntBASIC6.54□□□□□ -1.36
NEDD4P46934 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NEDD4P46934 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NEDD4P46934 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NEDD4P46934 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NEDD4P46934 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.54□□□□□ -1.36
NEDD4P46934 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
NEDD4P46934 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NEDD4P46934 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NEDD4P46934 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEDD4P46934 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.53□□□□□ -1.36
NEDD4P46934 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC6.53□□□□□ -1.36
NEDD4P46934 MIR323A-201ENST00000362199 86 ntBASIC6.53□□□□□ -1.36
NEDD4P46934 RN7SKP185-201ENST00000362813 326 ntBASIC6.53□□□□□ -1.36
NEDD4P46934 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NEDD4P46934 AL158827.1-201ENST00000416300 391 ntBASIC6.53□□□□□ -1.36
NEDD4P46934 AC079355.1-201ENST00000421770 223 ntBASIC6.53□□□□□ -1.36
NEDD4P46934 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEDD4P46934 AZGP1P2-201ENST00000454506 345 ntBASIC6.53□□□□□ -1.36
NEDD4P46934 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.53□□□□□ -1.36
NEDD4P46934 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.53□□□□□ -1.36
NEDD4P46934 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.53□□□□□ -1.36
NEDD4P46934 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.53□□□□□ -1.36
NEDD4P46934 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEDD4P46934 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.53□□□□□ -1.36
NEDD4P46934 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.53□□□□□ -1.36
NEDD4P46934 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.53□□□□□ -1.36
NEDD4P46934 AC132068.1-201ENST00000623805 459 ntBASIC6.53□□□□□ -1.36
NEDD4P46934 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
NEDD4P46934 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEDD4P46934 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NEDD4P46934 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
NEDD4P46934 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.53□□□□□ -1.36
NEDD4P46934 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEDD4P46934 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEDD4P46934 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.53□□□□□ -1.36
NEDD4P46934 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
NEDD4P46934 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
NEDD4P46934 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NEDD4P46934 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEDD4P46934 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
NEDD4P46934 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
NEDD4P46934 AC010329.1-201ENST00000593903 8328 ntBASIC6.52□□□□□ -1.37
NEDD4P46934 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEDD4P46934 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.52□□□□□ -1.37
NEDD4P46934 RNA5SP453-201ENST00000362503 119 ntBASIC6.52□□□□□ -1.37
NEDD4P46934 RPL7P58-201ENST00000402913 758 ntBASIC6.52□□□□□ -1.37
NEDD4P46934 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.52□□□□□ -1.37
NEDD4P46934 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.52□□□□□ -1.37
NEDD4P46934 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.52□□□□□ -1.37
NEDD4P46934 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC6.52□□□□□ -1.37
NEDD4P46934 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.52□□□□□ -1.37
NEDD4P46934 SNORD125-201ENST00000459538 96 ntBASIC6.52□□□□□ -1.37
NEDD4P46934 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.52□□□□□ -1.37
NEDD4P46934 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.52□□□□□ -1.37
NEDD4P46934 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.52□□□□□ -1.37
NEDD4P46934 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.52□□□□□ -1.37
NEDD4P46934 SEPT10P1-201ENST00000517342 1162 ntBASIC6.52□□□□□ -1.37
NEDD4P46934 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.52□□□□□ -1.37
NEDD4P46934 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.52□□□□□ -1.37
NEDD4P46934 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEDD4P46934 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
NEDD4P46934 AP000769.2-201ENST00000602344 396 ntBASIC6.52□□□□□ -1.37
NEDD4P46934 AC009237.13-201ENST00000603193 276 ntBASIC6.52□□□□□ -1.37
NEDD4P46934 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.52□□□□□ -1.37
NEDD4P46934 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.52□□□□□ -1.37
NEDD4P46934 AL049767.1-202ENST00000637826 242 ntBASIC6.52□□□□□ -1.37
NEDD4P46934 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
NEDD4P46934 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NEDD4P46934 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
NEDD4P46934 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
NEDD4P46934 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.52□□□□□ -1.37
NEDD4P46934 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.52□□□□□ -1.37
NEDD4P46934 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.52□□□□□ -1.37
NEDD4P46934 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEDD4P46934 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
NEDD4P46934 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NEDD4P46934 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
NEDD4P46934 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NEDD4P46934 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms