Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX2-1P43699 AL590762.3-201ENST00000436372 640 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NKX2-1P43699 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.86□□□□□ -1.63
NKX2-1P43699 SCAND3P1-201ENST00000439854 1060 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-1P43699 RBMY2TP-201ENST00000451162 947 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 CALM1P2-201ENST00000452941 448 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 NPM1P9-201ENST00000453156 844 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 AC069277.2-201ENST00000454211 432 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 MTND2P30-201ENST00000456663 382 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 RNU6-599P-201ENST00000459383 107 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 RNU6-1193P-201ENST00000459461 107 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 TFP1-201ENST00000460564 572 ntTSL 4 BASIC4.86□□□□□ -1.63
NKX2-1P43699 TFP1-203ENST00000490470 561 ntTSL 4 BASIC4.86□□□□□ -1.63
NKX2-1P43699 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NKX2-1P43699 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.86□□□□□ -1.63
NKX2-1P43699 OR4D12P-201ENST00000509361 911 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 KHDC1P1-201ENST00000511053 508 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.86□□□□□ -1.63
NKX2-1P43699 HMGB1P46-201ENST00000520062 610 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX2-1P43699 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-1P43699 OR4A43P-201ENST00000532938 908 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-1P43699 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX2-1P43699 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.86□□□□□ -1.63
NKX2-1P43699 AC126615.2-201ENST00000553003 515 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC4.86□□□□□ -1.63
NKX2-1P43699 AC007342.5-201ENST00000571340 2142 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX2-1P43699 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-1P43699 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
NKX2-1P43699 MTCO3P22-201ENST00000603219 784 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 KATNBL1P5-201ENST00000605015 517 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX2-1P43699 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX2-1P43699 uc_338.26-201ENST00000612659 160 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 MIR6883-201ENST00000614952 78 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 RNU6-368P-201ENST00000620928 107 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 RNU6-538P-201ENST00000622329 107 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 AC022400.9-201ENST00000623633 273 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 RPL23AP61-201ENST00000623642 466 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX2-1P43699 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX2-1P43699 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX2-1P43699 OFD1P15Y-201ENST00000411536 1392 ntBASIC4.86□□□□□ -1.63
NKX2-1P43699 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-1P43699 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-1P43699 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-1P43699 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX2-1P43699 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NKX2-1P43699 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX2-1P43699 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-1P43699 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX2-1P43699 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-1P43699 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-1P43699 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-1P43699 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-1P43699 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-1P43699 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-1P43699 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
NKX2-1P43699 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
NKX2-1P43699 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NKX2-1P43699 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-1P43699 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-1P43699 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-1P43699 AP005432.1-201ENST00000580891 3485 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NKX2-1P43699 OR10R3P-201ENST00000361688 942 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 RN7SKP185-201ENST00000362813 326 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 RNU105B-201ENST00000364478 208 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 RN7SKP279-201ENST00000411383 298 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 RPL26P37-201ENST00000411983 438 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 AL445213.1-201ENST00000412589 747 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX2-1P43699 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-1P43699 RPS15AP30-201ENST00000420976 390 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 RPL7AP14-201ENST00000424041 802 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX2-1P43699 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX2-1P43699 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-1P43699 AC234771.4-201ENST00000441416 730 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 RARRES2P3-201ENST00000457739 473 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX2-1P43699 AL603882.1-201ENST00000463059 681 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
NKX2-1P43699 AC107015.1-201ENST00000466902 747 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-1P43699 RPL12P31-201ENST00000478433 450 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 RN7SL655P-201ENST00000486087 298 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX2-1P43699 AC093325.1-201ENST00000508378 326 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 AC025768.1-201ENST00000510057 267 ntBASIC4.85□□□□□ -1.63
NKX2-1P43699 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX2-1P43699 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
NKX2-1P43699 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC4.85□□□□□ -1.63
NKX2-1P43699 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX2-1P43699 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms