Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HOXA13P31271 AC007386.1-201ENST00000455212 582 ntBASIC6.43□□□□□ -1.38
HOXA13P31271 RN7SL177P-201ENST00000476596 299 ntBASIC6.43□□□□□ -1.38
HOXA13P31271 UBA52P7-201ENST00000486088 380 ntBASIC6.43□□□□□ -1.38
HOXA13P31271 RN7SL547P-201ENST00000490793 290 ntBASIC6.43□□□□□ -1.38
HOXA13P31271 OR52A4P-203ENST00000498233 1014 ntBASIC6.43□□□□□ -1.38
HOXA13P31271 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HOXA13P31271 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.43□□□□□ -1.38
HOXA13P31271 NRBF2P4-201ENST00000520874 850 ntBASIC6.43□□□□□ -1.38
HOXA13P31271 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.43□□□□□ -1.38
HOXA13P31271 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.43□□□□□ -1.38
HOXA13P31271 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXA13P31271 AC007225.2-201ENST00000562529 256 ntBASIC6.43□□□□□ -1.38
HOXA13P31271 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.43□□□□□ -1.38
HOXA13P31271 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.43□□□□□ -1.38
HOXA13P31271 PPATP2-201ENST00000605635 508 ntBASIC6.43□□□□□ -1.38
HOXA13P31271 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.43□□□□□ -1.38
HOXA13P31271 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.43□□□□□ -1.38
HOXA13P31271 AC020658.4-201ENST00000613987 684 ntBASIC6.43□□□□□ -1.38
HOXA13P31271 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXA13P31271 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HOXA13P31271 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.43□□□□□ -1.38
HOXA13P31271 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HOXA13P31271 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
HOXA13P31271 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HOXA13P31271 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.43□□□□□ -1.38
HOXA13P31271 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXA13P31271 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.43□□□□□ -1.38
HOXA13P31271 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXA13P31271 RARSP1-201ENST00000542842 1418 ntBASIC6.42□□□□□ -1.38
HOXA13P31271 AC068870.1-201ENST00000563737 2455 ntBASIC6.42□□□□□ -1.38
HOXA13P31271 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXA13P31271 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HOXA13P31271 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXA13P31271 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXA13P31271 RN7SKP162-201ENST00000363605 345 ntBASIC6.42□□□□□ -1.38
HOXA13P31271 GAPDHP42-201ENST00000406848 981 ntBASIC6.42□□□□□ -1.38
HOXA13P31271 RN7SKP59-201ENST00000410520 314 ntBASIC6.42□□□□□ -1.38
HOXA13P31271 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXA13P31271 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.42□□□□□ -1.38
HOXA13P31271 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXA13P31271 AC092651.1-201ENST00000426110 312 ntBASIC6.42□□□□□ -1.38
HOXA13P31271 VN1R21P-201ENST00000426703 765 ntBASIC6.42□□□□□ -1.38
HOXA13P31271 BX119904.3-201ENST00000428194 957 ntBASIC6.42□□□□□ -1.38
HOXA13P31271 AL390879.1-201ENST00000439143 386 ntBASIC6.42□□□□□ -1.38
HOXA13P31271 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HOXA13P31271 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXA13P31271 AC108693.1-201ENST00000496068 432 ntBASIC6.42□□□□□ -1.38
HOXA13P31271 AC147055.1-201ENST00000509261 750 ntBASIC6.42□□□□□ -1.38
HOXA13P31271 IGKV2-19-201ENST00000518132 283 ntBASIC6.42□□□□□ -1.38
HOXA13P31271 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.42□□□□□ -1.38
HOXA13P31271 DHFRP1-201ENST00000579682 559 ntBASIC6.42□□□□□ -1.38
HOXA13P31271 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXA13P31271 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.42□□□□□ -1.38
HOXA13P31271 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXA13P31271 HIRAP1-201ENST00000605318 787 ntBASIC6.42□□□□□ -1.38
HOXA13P31271 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.42□□□□□ -1.38
HOXA13P31271 AC132068.1-201ENST00000623805 459 ntBASIC6.42□□□□□ -1.38
HOXA13P31271 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXA13P31271 AC034229.2-201ENST00000566945 2508 ntBASIC6.42□□□□□ -1.38
HOXA13P31271 CASC19-248ENST00000641674 1356 ntBASIC6.42□□□□□ -1.38
HOXA13P31271 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXA13P31271 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXA13P31271 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HOXA13P31271 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXA13P31271 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXA13P31271 AL161912.4-201ENST00000623889 2468 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
HOXA13P31271 AC104964.3-201ENST00000606115 2860 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXA13P31271 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXA13P31271 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
HOXA13P31271 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXA13P31271 RNA5SP326-201ENST00000363209 110 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXA13P31271 AC096921.1-201ENST00000411661 375 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 RPL35AP24-201ENST00000413846 330 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 NPM1P4-201ENST00000414095 812 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 RPS26P38-201ENST00000414476 348 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXA13P31271 BX510359.3-201ENST00000422168 306 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXA13P31271 HMGB1P32-201ENST00000425971 565 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 CFL1P1-202ENST00000432948 411 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 AC097523.2-201ENST00000435551 652 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 AL133445.1-201ENST00000467051 452 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.41□□□□□ -1.38
HOXA13P31271 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXA13P31271 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXA13P31271 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXA13P31271 AC090022.1-201ENST00000546569 311 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 DPPA3P2-201ENST00000553589 478 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 AC015720.2-201ENST00000567709 334 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 AL163952.1-202ENST00000569625 600 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 MRPS21P9-201ENST00000571150 257 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 AP000919.1-201ENST00000582850 985 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXA13P31271 AC010245.2-201ENST00000606908 1167 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 AC025574.2-201ENST00000615621 514 ntBASIC6.41□□□□□ -1.38
HOXA13P31271 AC005840.5-201ENST00000619166 599 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms