Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.5□□□□□ -1.37
COL4A5P29400 BTF3P13-201ENST00000513224 490 ntBASIC6.5□□□□□ -1.37
COL4A5P29400 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.5□□□□□ -1.37
COL4A5P29400 C1GALT1P3-201ENST00000522049 819 ntBASIC6.5□□□□□ -1.37
COL4A5P29400 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL4A5P29400 AL512310.9-201ENST00000553311 948 ntBASIC6.5□□□□□ -1.37
COL4A5P29400 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.5□□□□□ -1.37
COL4A5P29400 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
COL4A5P29400 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.5□□□□□ -1.37
COL4A5P29400 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.5□□□□□ -1.37
COL4A5P29400 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
COL4A5P29400 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL4A5P29400 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL4A5P29400 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A5P29400 AL078599.1-201ENST00000402075 293 ntBASIC6.49□□□□□ -1.37
COL4A5P29400 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.49□□□□□ -1.37
COL4A5P29400 USP24P1-201ENST00000433802 779 ntBASIC6.49□□□□□ -1.37
COL4A5P29400 AC073410.1-201ENST00000435125 589 ntBASIC6.49□□□□□ -1.37
COL4A5P29400 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.49□□□□□ -1.37
COL4A5P29400 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.49□□□□□ -1.37
COL4A5P29400 RPL36AP15-201ENST00000444514 266 ntBASIC6.49□□□□□ -1.37
COL4A5P29400 MEMO1P4-201ENST00000453590 386 ntBASIC6.49□□□□□ -1.37
COL4A5P29400 AC097484.1-201ENST00000471148 389 ntBASIC6.49□□□□□ -1.37
COL4A5P29400 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.49□□□□□ -1.37
COL4A5P29400 YWHABP2-201ENST00000540201 713 ntBASIC6.49□□□□□ -1.37
COL4A5P29400 OR11H3P-201ENST00000554547 982 ntBASIC6.49□□□□□ -1.37
COL4A5P29400 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.49□□□□□ -1.37
COL4A5P29400 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.49□□□□□ -1.37
COL4A5P29400 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.49□□□□□ -1.37
COL4A5P29400 AC135068.5-201ENST00000624197 983 ntBASIC6.49□□□□□ -1.37
COL4A5P29400 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.49□□□□□ -1.37
COL4A5P29400 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A5P29400 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A5P29400 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A5P29400 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A5P29400 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
COL4A5P29400 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.49□□□□□ -1.37
COL4A5P29400 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A5P29400 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A5P29400 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A5P29400 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A5P29400 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
COL4A5P29400 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A5P29400 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.49□□□□□ -1.37
COL4A5P29400 RAD17P2-201ENST00000451754 1977 ntBASIC6.49□□□□□ -1.37
COL4A5P29400 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
COL4A5P29400 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A5P29400 U3.3-201ENST00000362986 216 ntBASIC6.49□□□□□ -1.37
COL4A5P29400 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.49□□□□□ -1.37
COL4A5P29400 TMEM183AP1-205ENST00000432739 290 ntBASIC6.49□□□□□ -1.37
COL4A5P29400 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.49□□□□□ -1.37
COL4A5P29400 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.49□□□□□ -1.37
COL4A5P29400 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A5P29400 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.49□□□□□ -1.37
COL4A5P29400 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.49□□□□□ -1.37
COL4A5P29400 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.49□□□□□ -1.37
COL4A5P29400 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A5P29400 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A5P29400 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A5P29400 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A5P29400 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.49□□□□□ -1.37
COL4A5P29400 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
COL4A5P29400 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
COL4A5P29400 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A5P29400 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
COL4A5P29400 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A5P29400 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A5P29400 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A5P29400 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A5P29400 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A5P29400 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A5P29400 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A5P29400 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COL4A5P29400 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A5P29400 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A5P29400 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A5P29400 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A5P29400 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.48□□□□□ -1.37
COL4A5P29400 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A5P29400 RNA5SP455-201ENST00000365190 119 ntBASIC6.48□□□□□ -1.37
COL4A5P29400 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COL4A5P29400 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.48□□□□□ -1.37
COL4A5P29400 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A5P29400 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A5P29400 AC079080.1-201ENST00000479841 822 ntBASIC6.48□□□□□ -1.37
COL4A5P29400 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A5P29400 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.48□□□□□ -1.37
COL4A5P29400 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A5P29400 OR5AM1P-201ENST00000532136 1032 ntBASIC6.48□□□□□ -1.37
COL4A5P29400 OR5AN2P-201ENST00000534535 896 ntBASIC6.48□□□□□ -1.37
COL4A5P29400 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.48□□□□□ -1.37
COL4A5P29400 AC068790.7-201ENST00000602347 528 ntBASIC6.48□□□□□ -1.37
COL4A5P29400 NANOGP3-201ENST00000605855 286 ntBASIC6.48□□□□□ -1.37
COL4A5P29400 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A5P29400 AC022164.1-201ENST00000568767 2673 ntBASIC6.48□□□□□ -1.37
COL4A5P29400 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
COL4A5P29400 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A5P29400 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A5P29400 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A5P29400 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms