Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DMAP28067 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 SNORA21-201ENST00000362423 132 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 OR1L6-202ENST00000373684 1044 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 MIR1266-201ENST00000408125 84 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 RNF10P1-201ENST00000418589 369 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 AC012519.1-201ENST00000424588 610 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DMAP28067 GAPDHP19-201ENST00000431768 1005 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 AL389925.1-201ENST00000432257 728 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 AC010086.1-201ENST00000437359 1052 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 HMGN1P32-201ENST00000441744 256 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 AC016772.1-201ENST00000444170 1261 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 AC090804.1-201ENST00000448870 490 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 AP000797.2-201ENST00000475768 606 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DMAP28067 EIF4E2P2-201ENST00000492033 736 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 AC090638.1-201ENST00000498296 909 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 GAPDHP71-201ENST00000511530 1003 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 OSTC-204ENST00000512478 663 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 AC122688.1-201ENST00000541494 223 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 AC005632.2-201ENST00000564271 828 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 NIFKP4-201ENST00000567275 1192 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DMAP28067 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 AL021918.2-201ENST00000613415 194 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 AC022106.2-201ENST00000620114 757 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DMAP28067 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DMAP28067 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DMAP28067 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 MTCO1P28-201ENST00000574177 1528 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.87□□□□□ -1.63
HLA-DMAP28067 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DMAP28067 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DMAP28067 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DMAP28067 AL672167.1-204ENST00000641875 3017 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DMAP28067 AC008079.2-201ENST00000623543 20396 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DMAP28067 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DMAP28067 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
HLA-DMAP28067 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
HLA-DMAP28067 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
HLA-DMAP28067 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DMAP28067 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DMAP28067 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HLA-DMAP28067 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DMAP28067 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DMAP28067 RNU1-134P-201ENST00000362935 165 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 RNU1-146P-201ENST00000364015 165 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DMAP28067 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DMAP28067 MIR138-2-201ENST00000384916 84 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 AL117344.1-201ENST00000407196 616 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 OR13Z1P-201ENST00000416141 834 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 PTP4A1P1-201ENST00000420539 515 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DMAP28067 KCTD9P1-201ENST00000430462 1167 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DMAP28067 AL158214.1-201ENST00000444423 404 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 AL590004.3-202ENST00000445883 451 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 RPS18P1-201ENST00000447840 458 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 AC002553.3-201ENST00000453002 341 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DMAP28067 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DMAP28067 CR383658.1-201ENST00000514609 734 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DMAP28067 AC130365.2-201ENST00000525882 1201 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 TDGP1-201ENST00000543961 1229 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.86□□□□□ -1.63
HLA-DMAP28067 AC006349.1-201ENST00000555526 235 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DMAP28067 AL359715.3-201ENST00000569267 2123 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 AP005136.2-201ENST00000583253 1049 ntBASIC4.86□□□□□ -1.63
HLA-DMAP28067 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DMAP28067 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms