Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TNFSF4P23510 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TNFSF4P23510 AL512310.3-201ENST00000547023 1335 ntBASIC5.66□□□□□ -1.5
TNFSF4P23510 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
TNFSF4P23510 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.66□□□□□ -1.5
TNFSF4P23510 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.66□□□□□ -1.5
TNFSF4P23510 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TNFSF4P23510 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TNFSF4P23510 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TNFSF4P23510 AL139384.2-201ENST00000613809 3590 ntBASIC5.66□□□□□ -1.5
TNFSF4P23510 AL355377.1-201ENST00000621125 1653 ntBASIC5.66□□□□□ -1.5
TNFSF4P23510 AC007012.2-201ENST00000623206 1676 ntBASIC5.66□□□□□ -1.5
TNFSF4P23510 AC092079.1-201ENST00000558620 1985 ntBASIC5.66□□□□□ -1.5
TNFSF4P23510 AP003486.1-201ENST00000525716 3994 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 AL133268.1-201ENST00000405676 1401 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TNFSF4P23510 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TNFSF4P23510 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
TNFSF4P23510 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TNFSF4P23510 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TNFSF4P23510 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TNFSF4P23510 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TNFSF4P23510 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC5.65□□□□□ -1.5
TNFSF4P23510 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.65□□□□□ -1.5
TNFSF4P23510 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.65□□□□□ -1.5
TNFSF4P23510 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
TNFSF4P23510 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TNFSF4P23510 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TNFSF4P23510 RPL24P4-201ENST00000326586 421 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TNFSF4P23510 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.65□□□□□ -1.5
TNFSF4P23510 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TNFSF4P23510 ARSFP1-201ENST00000398758 477 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 AL034417.1-201ENST00000399343 800 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.65□□□□□ -1.5
TNFSF4P23510 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TNFSF4P23510 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.65□□□□□ -1.5
TNFSF4P23510 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.65□□□□□ -1.5
TNFSF4P23510 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.65□□□□□ -1.5
TNFSF4P23510 AC006509.1-201ENST00000420788 634 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.65□□□□□ -1.5
TNFSF4P23510 OSTCP5-201ENST00000425293 453 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TNFSF4P23510 NAP1L4P2-201ENST00000425958 899 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 GAPDHP19-201ENST00000431768 1005 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 HMGN1P32-201ENST00000441744 256 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.65□□□□□ -1.5
TNFSF4P23510 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.65□□□□□ -1.5
TNFSF4P23510 RPS18P1-201ENST00000447840 458 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.65□□□□□ -1.5
TNFSF4P23510 OFD1P3Y-201ENST00000453312 783 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.65□□□□□ -1.5
TNFSF4P23510 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.65□□□□□ -1.5
TNFSF4P23510 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.65□□□□□ -1.5
TNFSF4P23510 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TNFSF4P23510 AC114324.2-202ENST00000503812 134 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 HPRT1P2-201ENST00000505250 544 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.65□□□□□ -1.5
TNFSF4P23510 HPRT1P1-201ENST00000509498 657 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 AC008837.1-201ENST00000511513 412 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 OR52H2P-201ENST00000514607 902 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 PRELID3BP4-201ENST00000515476 571 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.65□□□□□ -1.5
TNFSF4P23510 AC034205.1-201ENST00000520621 638 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 NDUFS5P6-201ENST00000529136 295 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 OR8I1P-201ENST00000529291 931 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.65□□□□□ -1.5
TNFSF4P23510 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.65□□□□□ -1.5
TNFSF4P23510 AC087897.1-201ENST00000550134 156 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.65□□□□□ -1.5
TNFSF4P23510 AC005519.1-201ENST00000554490 601 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 MTCYBP23-201ENST00000558717 1102 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.65□□□□□ -1.5
TNFSF4P23510 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TNFSF4P23510 EIF1P6-201ENST00000600054 334 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 AC112220.2-201ENST00000605513 533 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TNFSF4P23510 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.65□□□□□ -1.5
TNFSF4P23510 AC013468.1-201ENST00000608680 598 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 AC063944.3-201ENST00000609969 533 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
TNFSF4P23510 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TNFSF4P23510 AC005277.2-201ENST00000617898 390 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 AC139769.3-201ENST00000618383 175 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.65□□□□□ -1.5
TNFSF4P23510 AC104985.3-201ENST00000623479 597 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 AC090506.2-201ENST00000624521 419 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.65□□□□□ -1.5
TNFSF4P23510 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.65□□□□□ -1.5
TNFSF4P23510 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.65□□□□□ -1.5
TNFSF4P23510 AL357140.4-201ENST00000636827 412 ntBASIC5.65□□□□□ -1.5
TNFSF4P23510 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
TNFSF4P23510 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TNFSF4P23510 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TNFSF4P23510 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TNFSF4P23510 NSRP1P1-201ENST00000444067 1693 ntBASIC5.65□□□□□ -1.51
TNFSF4P23510 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
TNFSF4P23510 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.65□□□□□ -1.51
TNFSF4P23510 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC5.65□□□□□ -1.51
TNFSF4P23510 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms