Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RPL34P3-201ENST00000421454 338 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.69□□□□□ -1.5
XRCC1P18887 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.69□□□□□ -1.5
XRCC1P18887 BX119321.1-201ENST00000428912 797 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.69□□□□□ -1.5
XRCC1P18887 AC064862.4-201ENST00000442180 334 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.69□□□□□ -1.5
XRCC1P18887 AC079080.1-201ENST00000479841 822 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.69□□□□□ -1.5
XRCC1P18887 RN7SL101P-201ENST00000496350 279 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 CYCSP22-201ENST00000517555 339 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.69□□□□□ -1.5
XRCC1P18887 AC090424.1-201ENST00000535243 736 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
XRCC1P18887 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.69□□□□□ -1.5
XRCC1P18887 AC007346.2-201ENST00000564816 892 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.69□□□□□ -1.5
XRCC1P18887 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.69□□□□□ -1.5
XRCC1P18887 LSM1P2-201ENST00000604911 322 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.69□□□□□ -1.5
XRCC1P18887 MIR6862-1-201ENST00000613016 70 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 MIR6862-2-201ENST00000614755 70 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 RN7SL544P-201ENST00000617232 284 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 RN7SL763P-201ENST00000620922 284 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 AC005618.4-201ENST00000625053 554 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 AC009950.2-201ENST00000636548 183 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.69□□□□□ -1.5
XRCC1P18887 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.69□□□□□ -1.5
XRCC1P18887 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
XRCC1P18887 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
XRCC1P18887 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
XRCC1P18887 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.69□□□□□ -1.5
XRCC1P18887 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
XRCC1P18887 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
XRCC1P18887 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
XRCC1P18887 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
XRCC1P18887 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
XRCC1P18887 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
XRCC1P18887 AP000473.2-201ENST00000602659 1537 ntBASIC5.69□□□□□ -1.5
XRCC1P18887 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.68□□□□□ -1.5
XRCC1P18887 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
XRCC1P18887 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
XRCC1P18887 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
XRCC1P18887 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.68□□□□□ -1.5
XRCC1P18887 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
XRCC1P18887 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
XRCC1P18887 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
XRCC1P18887 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
XRCC1P18887 AC004158.1-201ENST00000564508 4319 ntBASIC5.68□□□□□ -1.5
XRCC1P18887 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
XRCC1P18887 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
XRCC1P18887 RN7SKP69-201ENST00000365390 305 ntBASIC5.68□□□□□ -1.5
XRCC1P18887 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
XRCC1P18887 SNORA5.1-201ENST00000384275 131 ntBASIC5.68□□□□□ -1.5
XRCC1P18887 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.68□□□□□ -1.5
XRCC1P18887 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.68□□□□□ -1.5
XRCC1P18887 NPM1P18-201ENST00000434232 732 ntBASIC5.68□□□□□ -1.5
XRCC1P18887 AL391987.1-201ENST00000441025 200 ntBASIC5.68□□□□□ -1.5
XRCC1P18887 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.68□□□□□ -1.5
XRCC1P18887 LRRC37A14P-201ENST00000452297 462 ntBASIC5.68□□□□□ -1.5
XRCC1P18887 AC093166.4-201ENST00000457867 318 ntBASIC5.68□□□□□ -1.5
XRCC1P18887 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
XRCC1P18887 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.68□□□□□ -1.5
XRCC1P18887 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.68□□□□□ -1.5
XRCC1P18887 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.68□□□□□ -1.5
XRCC1P18887 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.68□□□□□ -1.5
XRCC1P18887 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.68□□□□□ -1.5
XRCC1P18887 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.68□□□□□ -1.5
XRCC1P18887 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.68□□□□□ -1.5
XRCC1P18887 AC011445.2-201ENST00000599274 173 ntBASIC5.68□□□□□ -1.5
XRCC1P18887 AL137246.1-201ENST00000607072 977 ntBASIC5.68□□□□□ -1.5
XRCC1P18887 AC022919.1-201ENST00000624979 626 ntBASIC5.68□□□□□ -1.5
XRCC1P18887 OR11H2-202ENST00000641517 1085 ntBASIC5.68□□□□□ -1.5
XRCC1P18887 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
XRCC1P18887 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
XRCC1P18887 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
XRCC1P18887 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
XRCC1P18887 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
XRCC1P18887 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
XRCC1P18887 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
XRCC1P18887 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
XRCC1P18887 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
XRCC1P18887 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.67□□□□□ -1.5
XRCC1P18887 AC027279.1-201ENST00000568885 4284 ntBASIC5.67□□□□□ -1.5
XRCC1P18887 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
XRCC1P18887 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
XRCC1P18887 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.67□□□□□ -1.5
XRCC1P18887 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
XRCC1P18887 AP005435.3-201ENST00000531260 3198 ntBASIC5.67□□□□□ -1.5
XRCC1P18887 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
XRCC1P18887 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
XRCC1P18887 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
XRCC1P18887 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
XRCC1P18887 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
XRCC1P18887 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
XRCC1P18887 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
XRCC1P18887 DPPA2P2-201ENST00000418220 897 ntBASIC5.67□□□□□ -1.5
XRCC1P18887 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.67□□□□□ -1.5
XRCC1P18887 AC019205.1-201ENST00000421830 730 ntBASIC5.67□□□□□ -1.5
XRCC1P18887 CHEK2P5-201ENST00000423877 246 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms