Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.04□□□□□ -1.44
PDGFRAP16234 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.04□□□□□ -1.44
PDGFRAP16234 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFRAP16234 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.04□□□□□ -1.44
PDGFRAP16234 AC139365.2-201ENST00000517972 253 ntBASIC6.04□□□□□ -1.44
PDGFRAP16234 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFRAP16234 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.04□□□□□ -1.44
PDGFRAP16234 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.04□□□□□ -1.44
PDGFRAP16234 NPM1P5-201ENST00000557228 838 ntBASIC6.04□□□□□ -1.44
PDGFRAP16234 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFRAP16234 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFRAP16234 VN1R81P-201ENST00000602085 372 ntBASIC6.04□□□□□ -1.44
PDGFRAP16234 AC009237.12-201ENST00000604755 742 ntBASIC6.04□□□□□ -1.44
PDGFRAP16234 AC026124.2-201ENST00000621847 656 ntBASIC6.04□□□□□ -1.44
PDGFRAP16234 AC002044.3-201ENST00000623314 541 ntBASIC6.04□□□□□ -1.44
PDGFRAP16234 AC073869.7-201ENST00000640874 297 ntBASIC6.04□□□□□ -1.44
PDGFRAP16234 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.04□□□□□ -1.44
PDGFRAP16234 AL158152.1-201ENST00000602652 1435 ntBASIC6.04□□□□□ -1.44
PDGFRAP16234 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.04□□□□□ -1.44
PDGFRAP16234 AC015689.2-201ENST00000528172 1738 ntBASIC6.04□□□□□ -1.44
PDGFRAP16234 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.04□□□□□ -1.44
PDGFRAP16234 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFRAP16234 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFRAP16234 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFRAP16234 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFRAP16234 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.04□□□□□ -1.44
PDGFRAP16234 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
PDGFRAP16234 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFRAP16234 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFRAP16234 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFRAP16234 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.03□□□□□ -1.44
PDGFRAP16234 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFRAP16234 AC007842.1-201ENST00000597336 2039 ntBASIC6.03□□□□□ -1.44
PDGFRAP16234 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
PDGFRAP16234 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
PDGFRAP16234 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
PDGFRAP16234 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFRAP16234 RNA5SP284-201ENST00000384547 118 ntBASIC6.03□□□□□ -1.44
PDGFRAP16234 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.03□□□□□ -1.44
PDGFRAP16234 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.03□□□□□ -1.44
PDGFRAP16234 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.03□□□□□ -1.44
PDGFRAP16234 FTLP19-201ENST00000433300 394 ntBASIC6.03□□□□□ -1.44
PDGFRAP16234 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFRAP16234 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.03□□□□□ -1.44
PDGFRAP16234 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.03□□□□□ -1.44
PDGFRAP16234 RPL23AP19-201ENST00000436229 369 ntBASIC6.03□□□□□ -1.44
PDGFRAP16234 CYCSP51-201ENST00000443545 318 ntBASIC6.03□□□□□ -1.44
PDGFRAP16234 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.03□□□□□ -1.44
PDGFRAP16234 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.03□□□□□ -1.44
PDGFRAP16234 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.03□□□□□ -1.44
PDGFRAP16234 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.03□□□□□ -1.44
PDGFRAP16234 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFRAP16234 AC079600.1-201ENST00000550326 297 ntBASIC6.03□□□□□ -1.44
PDGFRAP16234 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.03□□□□□ -1.44
PDGFRAP16234 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.03□□□□□ -1.44
PDGFRAP16234 AC096996.1-201ENST00000563813 325 ntBASIC6.03□□□□□ -1.44
PDGFRAP16234 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFRAP16234 MIR3614-201ENST00000581261 86 ntBASIC6.03□□□□□ -1.44
PDGFRAP16234 HIRAP1-201ENST00000605318 787 ntBASIC6.03□□□□□ -1.44
PDGFRAP16234 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.03□□□□□ -1.44
PDGFRAP16234 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFRAP16234 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFRAP16234 AC022919.1-201ENST00000624979 626 ntBASIC6.03□□□□□ -1.44
PDGFRAP16234 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFRAP16234 AP002512.4-202ENST00000641599 4530 ntBASIC6.03□□□□□ -1.44
PDGFRAP16234 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFRAP16234 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFRAP16234 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
PDGFRAP16234 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
PDGFRAP16234 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PDGFRAP16234 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFRAP16234 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.03□□□□□ -1.44
PDGFRAP16234 AC005261.6-201ENST00000623072 1387 ntBASIC6.03□□□□□ -1.44
PDGFRAP16234 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFRAP16234 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
PDGFRAP16234 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFRAP16234 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFRAP16234 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.03□□□□□ -1.44
PDGFRAP16234 AC007342.5-201ENST00000571340 2142 ntBASIC6.02□□□□□ -1.45
PDGFRAP16234 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.02□□□□□ -1.45
PDGFRAP16234 AC125336.1-201ENST00000508893 2827 ntBASIC6.02□□□□□ -1.45
PDGFRAP16234 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.02□□□□□ -1.45
PDGFRAP16234 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.02□□□□□ -1.45
PDGFRAP16234 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFRAP16234 AL031985.1-201ENST00000392713 418 ntBASIC6.02□□□□□ -1.45
PDGFRAP16234 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.02□□□□□ -1.45
PDGFRAP16234 RN7SKP279-201ENST00000411383 298 ntBASIC6.02□□□□□ -1.45
PDGFRAP16234 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.02□□□□□ -1.45
PDGFRAP16234 NIFKP3-201ENST00000417799 865 ntBASIC6.02□□□□□ -1.45
PDGFRAP16234 MTND6P12-201ENST00000428247 522 ntBASIC6.02□□□□□ -1.45
PDGFRAP16234 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.02□□□□□ -1.45
PDGFRAP16234 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.02□□□□□ -1.45
PDGFRAP16234 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.02□□□□□ -1.45
PDGFRAP16234 FCF1P7-201ENST00000451185 558 ntBASIC6.02□□□□□ -1.45
PDGFRAP16234 RPS23P2-201ENST00000463671 415 ntBASIC6.02□□□□□ -1.45
PDGFRAP16234 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.02□□□□□ -1.45
PDGFRAP16234 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.02□□□□□ -1.45
PDGFRAP16234 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.02□□□□□ -1.45
PDGFRAP16234 AC074255.1-201ENST00000511259 501 ntBASIC6.02□□□□□ -1.45
PDGFRAP16234 AC021146.10-201ENST00000515628 706 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms