Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL11A1P12107 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.22□□□□□ -1.41
COL11A1P12107 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL11A1P12107 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL11A1P12107 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.22□□□□□ -1.41
COL11A1P12107 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL11A1P12107 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
COL11A1P12107 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL11A1P12107 RNU1-146P-201ENST00000364015 165 ntBASIC6.22□□□□□ -1.41
COL11A1P12107 RPL23AP17-201ENST00000401064 499 ntBASIC6.22□□□□□ -1.41
COL11A1P12107 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.22□□□□□ -1.41
COL11A1P12107 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.22□□□□□ -1.41
COL11A1P12107 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.22□□□□□ -1.41
COL11A1P12107 AL645937.3-201ENST00000453647 936 ntBASIC6.22□□□□□ -1.41
COL11A1P12107 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.22□□□□□ -1.41
COL11A1P12107 HMGB1P40-201ENST00000525121 540 ntBASIC6.22□□□□□ -1.41
COL11A1P12107 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.22□□□□□ -1.41
COL11A1P12107 CR383656.6-201ENST00000550518 394 ntBASIC6.22□□□□□ -1.41
COL11A1P12107 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.22□□□□□ -1.41
COL11A1P12107 RN7SL356P-201ENST00000582228 248 ntBASIC6.22□□□□□ -1.41
COL11A1P12107 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL11A1P12107 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.22□□□□□ -1.41
COL11A1P12107 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL11A1P12107 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.21□□□□□ -1.41
COL11A1P12107 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.21□□□□□ -1.41
COL11A1P12107 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
COL11A1P12107 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
COL11A1P12107 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL11A1P12107 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.21□□□□□ -1.41
COL11A1P12107 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL11A1P12107 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL11A1P12107 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
COL11A1P12107 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL11A1P12107 SNORA67-201ENST00000384423 137 ntBASIC6.21□□□□□ -1.42
COL11A1P12107 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL11A1P12107 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.21□□□□□ -1.42
COL11A1P12107 AC211486.3-201ENST00000412694 621 ntBASIC6.21□□□□□ -1.42
COL11A1P12107 RBMY2KP-201ENST00000418221 992 ntBASIC6.21□□□□□ -1.42
COL11A1P12107 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.21□□□□□ -1.42
COL11A1P12107 RHOT1P3-201ENST00000436571 331 ntBASIC6.21□□□□□ -1.42
COL11A1P12107 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.21□□□□□ -1.42
COL11A1P12107 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.21□□□□□ -1.42
COL11A1P12107 AL451063.1-201ENST00000450164 1133 ntBASIC6.21□□□□□ -1.42
COL11A1P12107 AC058823.1-201ENST00000485315 474 ntBASIC6.21□□□□□ -1.42
COL11A1P12107 GTF2F2P1-201ENST00000511083 675 ntBASIC6.21□□□□□ -1.42
COL11A1P12107 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.21□□□□□ -1.42
COL11A1P12107 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL11A1P12107 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL11A1P12107 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
COL11A1P12107 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.42
COL11A1P12107 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.21□□□□□ -1.42
COL11A1P12107 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL11A1P12107 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.21□□□□□ -1.42
COL11A1P12107 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL11A1P12107 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
COL11A1P12107 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL11A1P12107 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL11A1P12107 AC007114.2-201ENST00000576014 4281 ntBASIC6.21□□□□□ -1.42
COL11A1P12107 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL11A1P12107 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.21□□□□□ -1.42
COL11A1P12107 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
COL11A1P12107 RNU4-4P-201ENST00000364588 130 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
COL11A1P12107 AC136624.1-201ENST00000400791 413 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 RNA5SP487-201ENST00000410186 122 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 AC004453.1-201ENST00000487895 408 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL11A1P12107 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.2□□□□□ -1.42
COL11A1P12107 AP001922.4-201ENST00000526967 290 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.2□□□□□ -1.42
COL11A1P12107 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.2□□□□□ -1.42
COL11A1P12107 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.2□□□□□ -1.42
COL11A1P12107 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
COL11A1P12107 AL513327.3-201ENST00000602618 469 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 AL049539.1-201ENST00000611964 459 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL11A1P12107 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.2□□□□□ -1.42
COL11A1P12107 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL11A1P12107 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL11A1P12107 AL078621.3-201ENST00000623707 2042 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL11A1P12107 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL11A1P12107 AC009962.1-201ENST00000567327 3813 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
COL11A1P12107 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL11A1P12107 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.2□□□□□ -1.42
COL11A1P12107 AL034546.1-201ENST00000623740 3693 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 AC011493.1-201ENST00000596753 1632 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 AC092747.4-201ENST00000620519 1861 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL11A1P12107 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.2□□□□□ -1.42
COL11A1P12107 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.2□□□□□ -1.42
COL11A1P12107 PANDAR-201ENST00000629595 1506 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 AC103591.2-201ENST00000265259 766 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 RN7SKP126-201ENST00000411143 300 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.2□□□□□ -1.42
COL11A1P12107 RNGTTP1-201ENST00000420965 728 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 GSTM5P1-201ENST00000434751 660 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 AL596266.1-201ENST00000448132 400 ntBASIC6.2□□□□□ -1.42
COL11A1P12107 AC092754.1-201ENST00000472975 479 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms