Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL1P09341 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.29□□□□□ -1.72
CXCL1P09341 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
CXCL1P09341 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.29□□□□□ -1.72
CXCL1P09341 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL1P09341 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL1P09341 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
CXCL1P09341 AC012254.3-201ENST00000591183 2117 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.28□□□□□ -1.72
CXCL1P09341 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL1P09341 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL1P09341 AL360270.2-201ENST00000562952 5985 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 AC100757.1-201ENST00000616872 1835 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL1P09341 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CXCL1P09341 EIF3EP1-201ENST00000433978 1316 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL1P09341 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.28□□□□□ -1.72
CXCL1P09341 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.28□□□□□ -1.72
CXCL1P09341 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL1P09341 RN7SKP292-201ENST00000365522 317 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 SNORA48.4-201ENST00000391089 134 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL1P09341 MIR1266-201ENST00000408125 84 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 RPL36AP10-201ENST00000421785 322 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 AC019205.1-201ENST00000421830 730 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.28□□□□□ -1.72
CXCL1P09341 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.28□□□□□ -1.72
CXCL1P09341 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.28□□□□□ -1.72
CXCL1P09341 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.28□□□□□ -1.72
CXCL1P09341 FTLP8-201ENST00000446770 267 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.28□□□□□ -1.72
CXCL1P09341 AL034369.1-201ENST00000453808 477 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 AC011225.1-201ENST00000457751 369 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CXCL1P09341 ATP5LP5-201ENST00000483050 299 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 RN7SL267P-201ENST00000485107 261 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL1P09341 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL1P09341 IGBP1P4-201ENST00000503202 879 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.28□□□□□ -1.72
CXCL1P09341 HMGB3P16-201ENST00000508037 287 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.28□□□□□ -1.72
CXCL1P09341 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.28□□□□□ -1.72
CXCL1P09341 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.28□□□□□ -1.72
CXCL1P09341 CR383658.1-201ENST00000514609 734 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.28□□□□□ -1.72
CXCL1P09341 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL1P09341 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.28□□□□□ -1.72
CXCL1P09341 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
CXCL1P09341 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.28□□□□□ -1.72
CXCL1P09341 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.28□□□□□ -1.72
CXCL1P09341 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CXCL1P09341 AP005136.2-201ENST00000583253 1049 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 AL589765.6-201ENST00000601909 549 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.28□□□□□ -1.72
CXCL1P09341 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.28□□□□□ -1.72
CXCL1P09341 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.28□□□□□ -1.72
CXCL1P09341 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.28□□□□□ -1.72
CXCL1P09341 CLUHP10-201ENST00000631979 980 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 AC099654.11-201ENST00000638857 294 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL1P09341 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL1P09341 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL1P09341 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL1P09341 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL1P09341 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.28□□□□□ -1.72
CXCL1P09341 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.28□□□□□ -1.72
CXCL1P09341 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.73
CXCL1P09341 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL1P09341 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL1P09341 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL1P09341 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL1P09341 MTCO1P28-201ENST00000574177 1528 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL1P09341 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL1P09341 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL1P09341 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL1P09341 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL1P09341 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.27□□□□□ -1.73
CXCL1P09341 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CXCL1P09341 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.27□□□□□ -1.73
CXCL1P09341 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL1P09341 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CXCL1P09341 AC005522.1-201ENST00000395416 346 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 AC013442.1-201ENST00000397347 228 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 AL132875.1-201ENST00000403623 949 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.27□□□□□ -1.73
CXCL1P09341 THEM7P-201ENST00000419556 672 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.27□□□□□ -1.73
CXCL1P09341 AL358176.3-201ENST00000420757 454 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 AC006509.1-201ENST00000420788 634 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.27□□□□□ -1.73
CXCL1P09341 GAPDHP19-201ENST00000431768 1005 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 AC128677.1-201ENST00000436016 442 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC4.27□□□□□ -1.73
CXCL1P09341 AC016772.1-201ENST00000444170 1261 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 CYCSP24-201ENST00000445119 316 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 OR7E116P-201ENST00000448529 957 ntBASIC4.27□□□□□ -1.73
CXCL1P09341 RN7SL393P-201ENST00000463588 296 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms