Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 CCAT2-201ENST00000630920 1752 ntBASIC5.62□□□□□ -1.51
HLA-DQB2P05538 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DQB2P05538 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 AL137058.3-201ENST00000624531 3099 ntBASIC5.61□□□□□ -1.51
HLA-DQB2P05538 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 RN7SKP28-201ENST00000364770 305 ntBASIC5.61□□□□□ -1.51
HLA-DQB2P05538 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 MIR551A-201ENST00000385042 96 ntBASIC5.61□□□□□ -1.51
HLA-DQB2P05538 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 RN7SKP286-201ENST00000410894 299 ntBASIC5.61□□□□□ -1.51
HLA-DQB2P05538 SDHDP6-201ENST00000414693 480 ntBASIC5.61□□□□□ -1.51
HLA-DQB2P05538 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 TNPO1P1-201ENST00000423641 1138 ntBASIC5.61□□□□□ -1.51
HLA-DQB2P05538 AC104843.2-201ENST00000427666 297 ntBASIC5.61□□□□□ -1.51
HLA-DQB2P05538 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.61□□□□□ -1.51
HLA-DQB2P05538 RN7SL188P-201ENST00000469842 285 ntBASIC5.61□□□□□ -1.51
HLA-DQB2P05538 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 PPIAP19-201ENST00000486414 492 ntBASIC5.61□□□□□ -1.51
HLA-DQB2P05538 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 AC021106.1-201ENST00000509020 1058 ntBASIC5.61□□□□□ -1.51
HLA-DQB2P05538 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 MTATP6P1-201ENST00000514057 681 ntBASIC5.61□□□□□ -1.51
HLA-DQB2P05538 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 AC027544.3-201ENST00000535082 757 ntBASIC5.61□□□□□ -1.51
HLA-DQB2P05538 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 AP005403.1-201ENST00000579720 229 ntBASIC5.61□□□□□ -1.51
HLA-DQB2P05538 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 AC007683.2-201ENST00000624681 714 ntBASIC5.61□□□□□ -1.51
HLA-DQB2P05538 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DQB2P05538 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 AC018765.1-201ENST00000623357 3446 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 AC079097.1-201ENST00000512187 1399 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 RNA5SP453-201ENST00000362503 119 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 GABARAPL3-201ENST00000412799 354 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 AL158827.1-201ENST00000416300 391 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 GAPDHP34-201ENST00000432112 823 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 AC073465.2-201ENST00000440938 498 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 AC073909.1-201ENST00000447112 999 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 AL358876.1-201ENST00000453364 1075 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 YWHAEP1-201ENST00000453697 763 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 RN7SL273P-201ENST00000481561 299 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 MIR1273E-201ENST00000581165 102 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 AL139124.1-201ENST00000609123 421 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 AC126175.1-201ENST00000617041 758 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 MIR6133-201ENST00000617057 108 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 AC007998.4-201ENST00000612496 2533 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms