Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RNU1-136P-201ENST00000384181 164 ntBASIC6.67□□□□□ -1.34
COL1A1P02452 AL109941.1-201ENST00000401925 229 ntBASIC6.67□□□□□ -1.34
COL1A1P02452 RPL37P18-201ENST00000411602 243 ntBASIC6.67□□□□□ -1.34
COL1A1P02452 SRSF1P1-201ENST00000424058 520 ntBASIC6.67□□□□□ -1.34
COL1A1P02452 FABP7P2-201ENST00000429946 379 ntBASIC6.67□□□□□ -1.34
COL1A1P02452 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.67□□□□□ -1.34
COL1A1P02452 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.67□□□□□ -1.34
COL1A1P02452 MEMO1P4-201ENST00000453590 386 ntBASIC6.67□□□□□ -1.34
COL1A1P02452 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.67□□□□□ -1.34
COL1A1P02452 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL1A1P02452 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.67□□□□□ -1.34
COL1A1P02452 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.67□□□□□ -1.34
COL1A1P02452 RNU6-941P-201ENST00000516346 108 ntBASIC6.67□□□□□ -1.34
COL1A1P02452 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.67□□□□□ -1.34
COL1A1P02452 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.67□□□□□ -1.34
COL1A1P02452 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.67□□□□□ -1.34
COL1A1P02452 RPL10P14-201ENST00000565265 298 ntBASIC6.67□□□□□ -1.34
COL1A1P02452 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.67□□□□□ -1.34
COL1A1P02452 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.67□□□□□ -1.34
COL1A1P02452 MIR6820-201ENST00000611508 62 ntBASIC6.67□□□□□ -1.34
COL1A1P02452 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL1A1P02452 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL1A1P02452 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
COL1A1P02452 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL1A1P02452 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
COL1A1P02452 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL1A1P02452 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL1A1P02452 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL1A1P02452 AL034549.2-201ENST00000618285 3373 ntBASIC6.67□□□□□ -1.34
COL1A1P02452 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
COL1A1P02452 AC018765.1-201ENST00000623357 3446 ntBASIC6.67□□□□□ -1.34
COL1A1P02452 AC140479.2-201ENST00000421567 3130 ntBASIC6.67□□□□□ -1.34
COL1A1P02452 AC013268.3-201ENST00000262716 2324 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.66□□□□□ -1.34
COL1A1P02452 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.66□□□□□ -1.34
COL1A1P02452 GNG5P2-201ENST00000372054 207 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 AC009784.1-201ENST00000426484 460 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 TMEM183AP1-205ENST00000432739 290 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.66□□□□□ -1.34
COL1A1P02452 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.66□□□□□ -1.34
COL1A1P02452 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL1A1P02452 RPL7P61-201ENST00000451721 751 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 RN7SL97P-201ENST00000486780 299 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 PMS2P3-207ENST00000529061 717 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.66□□□□□ -1.34
COL1A1P02452 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.66□□□□□ -1.34
COL1A1P02452 AP002505.2-201ENST00000623585 696 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL1A1P02452 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.66□□□□□ -1.34
COL1A1P02452 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
COL1A1P02452 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL1A1P02452 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL1A1P02452 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
COL1A1P02452 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL1A1P02452 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL1A1P02452 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL1A1P02452 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.66□□□□□ -1.34
COL1A1P02452 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
COL1A1P02452 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL1A1P02452 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL1A1P02452 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COL1A1P02452 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL1A1P02452 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL1A1P02452 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL1A1P02452 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL1A1P02452 RNA5SP305-201ENST00000362665 119 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL1A1P02452 DSTNP5-201ENST00000427921 523 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.66□□□□□ -1.34
COL1A1P02452 H3F3BP1-201ENST00000440551 403 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.66□□□□□ -1.34
COL1A1P02452 AC105399.1-202ENST00000447303 205 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 AL389915.2-201ENST00000454576 441 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 RPL7P6-201ENST00000480903 738 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.66□□□□□ -1.34
COL1A1P02452 RN7SKP66-201ENST00000516681 231 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 MIR4646-201ENST00000580775 63 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.66□□□□□ -1.34
COL1A1P02452 AC009163.6-201ENST00000612367 342 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 AC090510.2-201ENST00000617465 629 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.66□□□□□ -1.34
COL1A1P02452 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COL1A1P02452 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL1A1P02452 AL021877.2-201ENST00000624442 10684 ntBASIC6.66□□□□□ -1.34
COL1A1P02452 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL1A1P02452 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.65□□□□□ -1.34
COL1A1P02452 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.65□□□□□ -1.34
COL1A1P02452 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL1A1P02452 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.65□□□□□ -1.34
COL1A1P02452 AC083899.1-201ENST00000454465 3819 ntBASIC6.65□□□□□ -1.34
COL1A1P02452 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.65□□□□□ -1.34
COL1A1P02452 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.34
COL1A1P02452 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL1A1P02452 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL1A1P02452 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL1A1P02452 RPL23P2-201ENST00000320371 421 ntBASIC6.65□□□□□ -1.35
COL1A1P02452 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.65□□□□□ -1.35
COL1A1P02452 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.65□□□□□ -1.35
COL1A1P02452 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL1A1P02452 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms