Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC4.75□□□□□ -1.65
UPK1BO75841 AC109638.1-201ENST00000417406 326 ntBASIC4.75□□□□□ -1.65
UPK1BO75841 MARK2P12-201ENST00000420129 585 ntBASIC4.75□□□□□ -1.65
UPK1BO75841 EIF4A1P1-201ENST00000420241 934 ntBASIC4.75□□□□□ -1.65
UPK1BO75841 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.75□□□□□ -1.65
UPK1BO75841 FECHP1-201ENST00000431896 1214 ntBASIC4.75□□□□□ -1.65
UPK1BO75841 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.75□□□□□ -1.65
UPK1BO75841 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1BO75841 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.75□□□□□ -1.65
UPK1BO75841 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1BO75841 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.75□□□□□ -1.65
UPK1BO75841 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.75□□□□□ -1.65
UPK1BO75841 RPS7P10-201ENST00000464254 603 ntBASIC4.75□□□□□ -1.65
UPK1BO75841 AC106760.2-201ENST00000504159 619 ntBASIC4.75□□□□□ -1.65
UPK1BO75841 SUMO2P4-201ENST00000504193 276 ntBASIC4.75□□□□□ -1.65
UPK1BO75841 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.75□□□□□ -1.65
UPK1BO75841 SNX18P25-201ENST00000510539 758 ntBASIC4.75□□□□□ -1.65
UPK1BO75841 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.75□□□□□ -1.65
UPK1BO75841 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC4.75□□□□□ -1.65
UPK1BO75841 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC4.75□□□□□ -1.65
UPK1BO75841 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.75□□□□□ -1.65
UPK1BO75841 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.75□□□□□ -1.65
UPK1BO75841 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC4.75□□□□□ -1.65
UPK1BO75841 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
UPK1BO75841 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.75□□□□□ -1.65
UPK1BO75841 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC4.75□□□□□ -1.65
UPK1BO75841 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC4.75□□□□□ -1.65
UPK1BO75841 AC024451.4-201ENST00000602578 752 ntBASIC4.75□□□□□ -1.65
UPK1BO75841 SNORD91B-202ENST00000608459 222 ntBASIC4.75□□□□□ -1.65
UPK1BO75841 AL122125.1-201ENST00000616999 600 ntBASIC4.75□□□□□ -1.65
UPK1BO75841 MIR6811-201ENST00000620409 58 ntBASIC4.75□□□□□ -1.65
UPK1BO75841 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.75□□□□□ -1.65
UPK1BO75841 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1BO75841 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
UPK1BO75841 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1BO75841 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.75□□□□□ -1.65
UPK1BO75841 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
UPK1BO75841 AC079298.1-201ENST00000625026 1619 ntBASIC4.75□□□□□ -1.65
UPK1BO75841 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.75□□□□□ -1.65
UPK1BO75841 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.75□□□□□ -1.65
UPK1BO75841 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.75□□□□□ -1.65
UPK1BO75841 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1BO75841 NEAT1-202ENST00000501122 22743 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1BO75841 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1BO75841 PWAR1-201ENST00000624188 2414 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
UPK1BO75841 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1BO75841 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.74□□□□□ -1.65
UPK1BO75841 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1BO75841 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1BO75841 GAPDHP24-201ENST00000328713 983 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1BO75841 RNU1-19P-201ENST00000363306 165 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1BO75841 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
UPK1BO75841 SOD1P1-201ENST00000407803 440 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 SNORA11D-201ENST00000408548 128 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 SNORA11E-201ENST00000408778 128 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC4.74□□□□□ -1.65
UPK1BO75841 KIF4CP-201ENST00000422742 1279 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 AC104843.2-201ENST00000427666 297 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 AL645939.3-201ENST00000435408 225 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.74□□□□□ -1.65
UPK1BO75841 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.74□□□□□ -1.65
UPK1BO75841 AL445433.1-201ENST00000457507 257 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.74□□□□□ -1.65
UPK1BO75841 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.74□□□□□ -1.65
UPK1BO75841 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 AC105031.1-201ENST00000518550 476 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 CYCSP25-201ENST00000525280 316 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.74□□□□□ -1.65
UPK1BO75841 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC4.74□□□□□ -1.65
UPK1BO75841 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.74□□□□□ -1.65
UPK1BO75841 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.74□□□□□ -1.65
UPK1BO75841 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.74□□□□□ -1.65
UPK1BO75841 AC084033.2-201ENST00000551532 967 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 OR11H3P-201ENST00000554547 982 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 AC096996.1-201ENST00000563813 325 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
UPK1BO75841 MIR3157-201ENST00000578688 85 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 RN7SL52P-201ENST00000584271 284 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 NDUFA3P1-201ENST00000588007 252 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 AC012254.3-201ENST00000591183 2117 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.74□□□□□ -1.65
UPK1BO75841 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.74□□□□□ -1.65
UPK1BO75841 AC244107.2-201ENST00000611773 76 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 RN7SL787P-201ENST00000613000 284 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 GAPDHP41-201ENST00000613707 975 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 RN7SL544P-201ENST00000617232 284 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 RN7SL763P-201ENST00000620922 284 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 AC135068.5-201ENST00000624197 983 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.74□□□□□ -1.65
UPK1BO75841 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.74□□□□□ -1.65
UPK1BO75841 AC073869.8-201ENST00000641806 335 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
UPK1BO75841 UGT2B26P-201ENST00000508672 1613 ntBASIC4.74□□□□□ -1.65
UPK1BO75841 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
UPK1BO75841 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
UPK1BO75841 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms