Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 CASC19-212ENST00000641153 1287 ntBASIC5.59□□□□□ -1.51
HOXA3O43365 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA3O43365 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXA3O43365 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA3O43365 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA3O43365 MTND5P29-201ENST00000458676 1807 ntBASIC5.59□□□□□ -1.51
HOXA3O43365 AC011592.1-201ENST00000624647 3634 ntBASIC5.59□□□□□ -1.51
HOXA3O43365 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA3O43365 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA3O43365 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HOXA3O43365 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC5.59□□□□□ -1.52
HOXA3O43365 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HOXA3O43365 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HOXA3O43365 CASC19-243ENST00000641588 1546 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA3O43365 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA3O43365 TPTE2P2-201ENST00000403471 1466 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA3O43365 CAST-202ENST00000325674 3356 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXA3O43365 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA3O43365 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HOXA3O43365 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
HOXA3O43365 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
HOXA3O43365 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA3O43365 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA3O43365 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXA3O43365 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXA3O43365 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA3O43365 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXA3O43365 AC110716.2-201ENST00000563865 3945 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA3O43365 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA3O43365 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXA3O43365 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA3O43365 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HOXA3O43365 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXA3O43365 Y_RNA.560-201ENST00000384689 102 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA3O43365 AL035419.1-201ENST00000397037 564 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 CBX1P3-201ENST00000413296 527 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 AC004022.2-201ENST00000413824 193 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXA3O43365 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA3O43365 RPS7P12-201ENST00000422385 582 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 SPATA20P1-201ENST00000423089 438 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA3O43365 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA3O43365 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXA3O43365 OR5AW1P-201ENST00000426334 1006 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA3O43365 AC244035.1-201ENST00000430042 390 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 YWHAEP5-201ENST00000431545 765 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA3O43365 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA3O43365 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA3O43365 AC114755.4-201ENST00000439114 443 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA3O43365 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA3O43365 MTND3P1-201ENST00000441336 220 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 AC092601.1-201ENST00000444526 383 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 RBMY3AP-201ENST00000449381 1145 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 AC099670.1-201ENST00000455141 783 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 RPL23AP37-201ENST00000479658 549 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 OR9A1P-202ENST00000484361 945 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 AL117692.1-201ENST00000494283 713 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 AC092045.1-201ENST00000495716 1231 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA3O43365 AC104090.1-201ENST00000506341 1171 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXA3O43365 AC026782.2-201ENST00000510845 636 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA3O43365 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HOXA3O43365 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA3O43365 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA3O43365 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA3O43365 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.58□□□□□ -1.52
HOXA3O43365 AC134698.4-201ENST00000523451 826 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXA3O43365 OR7E154P-201ENST00000525174 932 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 AC105233.3-201ENST00000531125 744 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA3O43365 AC007537.1-201ENST00000539347 327 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 AL121766.1-201ENST00000547436 487 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.58□□□□□ -1.52
HOXA3O43365 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA3O43365 HIGD1AP17-201ENST00000554576 276 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA3O43365 MIR212-201ENST00000586026 110 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 VN1R82P-201ENST00000601481 356 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 AC006539.2-201ENST00000601729 572 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 AL021997.1-201ENST00000605757 193 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 AL139286.2-201ENST00000606838 396 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA3O43365 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXA3O43365 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA3O43365 AP005212.3-201ENST00000619964 528 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 AC092656.1-203ENST00000624134 423 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 AC027559.1-201ENST00000636288 271 ntBASIC5.58□□□□□ -1.52
HOXA3O43365 MFSD8-245ENST00000641743 948 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms