Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
SOX1O00570 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC7.32□□□□□ -1.24
SOX1O00570 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
SOX1O00570 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
SOX1O00570 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 FTO-222ENST00000637969 2889 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 MAPK10-343ENST00000641677 2546 ntBASIC7.31□□□□□ -1.24
SOX1O00570 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SOX1O00570 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 U3.4-201ENST00000363352 213 ntBASIC7.31□□□□□ -1.24
SOX1O00570 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SOX1O00570 ATP5F1P4-201ENST00000397288 746 ntBASIC7.31□□□□□ -1.24
SOX1O00570 DNAJC19P6-201ENST00000401853 280 ntBASIC7.31□□□□□ -1.24
SOX1O00570 RN7SKP142-201ENST00000411236 328 ntBASIC7.31□□□□□ -1.24
SOX1O00570 AC068138.1-201ENST00000412635 217 ntBASIC7.31□□□□□ -1.24
SOX1O00570 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.31□□□□□ -1.24
SOX1O00570 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC7.31□□□□□ -1.24
SOX1O00570 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.31□□□□□ -1.24
SOX1O00570 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.31□□□□□ -1.24
SOX1O00570 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC7.31□□□□□ -1.24
SOX1O00570 AC092017.2-201ENST00000427600 362 ntBASIC7.31□□□□□ -1.24
SOX1O00570 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC7.31□□□□□ -1.24
SOX1O00570 DEFA9P-201ENST00000433042 285 ntBASIC7.31□□□□□ -1.24
SOX1O00570 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 IGBP1P3-201ENST00000447449 1000 ntBASIC7.31□□□□□ -1.24
SOX1O00570 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 PPIAP27-201ENST00000453800 265 ntBASIC7.31□□□□□ -1.24
SOX1O00570 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.31□□□□□ -1.24
SOX1O00570 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.31□□□□□ -1.24
SOX1O00570 RPL7P1-201ENST00000468161 747 ntBASIC7.31□□□□□ -1.24
SOX1O00570 RPL7P9-201ENST00000468715 747 ntBASIC7.31□□□□□ -1.24
SOX1O00570 AC112198.1-201ENST00000505369 1220 ntBASIC7.31□□□□□ -1.24
SOX1O00570 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC7.31□□□□□ -1.24
SOX1O00570 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC7.31□□□□□ -1.24
SOX1O00570 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 MTCO3P15-201ENST00000526563 574 ntBASIC7.31□□□□□ -1.24
SOX1O00570 AL139174.1-201ENST00000531489 886 ntBASIC7.31□□□□□ -1.24
SOX1O00570 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC7.31□□□□□ -1.24
SOX1O00570 AC026898.1-201ENST00000586404 571 ntBASIC7.31□□□□□ -1.24
SOX1O00570 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC7.31□□□□□ -1.24
SOX1O00570 Z99129.1-201ENST00000612510 255 ntBASIC7.31□□□□□ -1.24
SOX1O00570 AL139418.1-201ENST00000613613 177 ntBASIC7.31□□□□□ -1.24
SOX1O00570 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC7.31□□□□□ -1.24
SOX1O00570 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.31□□□□□ -1.24
SOX1O00570 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
SOX1O00570 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
SOX1O00570 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SOX1O00570 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX1O00570 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC7.31□□□□□ -1.24
SOX1O00570 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX1O00570 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SOX1O00570 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SOX1O00570 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SOX1O00570 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SOX1O00570 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SOX1O00570 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SOX1O00570 TATDN2P3-201ENST00000452855 3665 ntBASIC7.3□□□□□ -1.24
SOX1O00570 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SOX1O00570 AC016582.1-202ENST00000636341 2982 ntBASIC7.3□□□□□ -1.24
SOX1O00570 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX1O00570 RBPJP7-201ENST00000442803 1447 ntBASIC7.3□□□□□ -1.24
SOX1O00570 RBPJP5-201ENST00000449433 1447 ntBASIC7.3□□□□□ -1.24
SOX1O00570 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.3□□□□□ -1.24
SOX1O00570 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
SOX1O00570 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.3□□□□□ -1.24
SOX1O00570 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SOX1O00570 RNU6-797P-201ENST00000363101 109 ntBASIC7.3□□□□□ -1.24
SOX1O00570 MIR585-201ENST00000384887 94 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms