Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
FOXN3O00409 MTND4P9-201ENST00000507819 1346 ntBASIC6.42□□□□□ -1.38
FOXN3O00409 CDC27P2-201ENST00000425026 1922 ntBASIC6.42□□□□□ -1.38
FOXN3O00409 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
FOXN3O00409 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
FOXN3O00409 PSG10P-201ENST00000501199 1500 ntBASIC6.41□□□□□ -1.38
FOXN3O00409 AL359955.1-201ENST00000455242 3275 ntBASIC6.41□□□□□ -1.38
FOXN3O00409 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.41□□□□□ -1.38
FOXN3O00409 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
FOXN3O00409 RN7SKP171-201ENST00000364417 303 ntBASIC6.41□□□□□ -1.38
FOXN3O00409 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
FOXN3O00409 ATP5F1P6-201ENST00000402768 767 ntBASIC6.41□□□□□ -1.38
FOXN3O00409 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
FOXN3O00409 RN7SKP86-201ENST00000410454 332 ntBASIC6.41□□□□□ -1.38
FOXN3O00409 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.41□□□□□ -1.38
FOXN3O00409 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.41□□□□□ -1.38
FOXN3O00409 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.41□□□□□ -1.38
FOXN3O00409 TRIM60P16-201ENST00000444048 694 ntBASIC6.41□□□□□ -1.38
FOXN3O00409 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.41□□□□□ -1.38
FOXN3O00409 REG1CP-206ENST00000447469 496 ntBASIC6.41□□□□□ -1.38
FOXN3O00409 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.41□□□□□ -1.38
FOXN3O00409 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.41□□□□□ -1.38
FOXN3O00409 RN7SL254P-201ENST00000460609 284 ntBASIC6.41□□□□□ -1.38
FOXN3O00409 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.41□□□□□ -1.38
FOXN3O00409 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.41□□□□□ -1.38
FOXN3O00409 AC018797.1-201ENST00000510791 255 ntBASIC6.41□□□□□ -1.38
FOXN3O00409 RNU6-334P-201ENST00000517072 102 ntBASIC6.41□□□□□ -1.38
FOXN3O00409 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.41□□□□□ -1.38
FOXN3O00409 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.41□□□□□ -1.38
FOXN3O00409 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.41□□□□□ -1.38
FOXN3O00409 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.41□□□□□ -1.38
FOXN3O00409 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.41□□□□□ -1.38
FOXN3O00409 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
FOXN3O00409 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.41□□□□□ -1.38
FOXN3O00409 AC007346.1-201ENST00000569208 867 ntBASIC6.41□□□□□ -1.38
FOXN3O00409 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
FOXN3O00409 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.41□□□□□ -1.38
FOXN3O00409 MTCO3P22-201ENST00000603219 784 ntBASIC6.41□□□□□ -1.38
FOXN3O00409 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.41□□□□□ -1.38
FOXN3O00409 AC124916.2-201ENST00000604416 224 ntBASIC6.41□□□□□ -1.38
FOXN3O00409 OR8G7P-201ENST00000616658 848 ntBASIC6.41□□□□□ -1.38
FOXN3O00409 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.41□□□□□ -1.38
FOXN3O00409 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.41□□□□□ -1.38
FOXN3O00409 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.41□□□□□ -1.38
FOXN3O00409 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
FOXN3O00409 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.41□□□□□ -1.38
FOXN3O00409 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
FOXN3O00409 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
FOXN3O00409 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.41□□□□□ -1.38
FOXN3O00409 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
FOXN3O00409 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
FOXN3O00409 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
FOXN3O00409 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
FOXN3O00409 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
FOXN3O00409 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.4□□□□□ -1.38
FOXN3O00409 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
FOXN3O00409 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
FOXN3O00409 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.4□□□□□ -1.38
FOXN3O00409 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
FOXN3O00409 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
FOXN3O00409 AC097063.1-201ENST00000426714 1797 ntBASIC6.4□□□□□ -1.38
FOXN3O00409 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
FOXN3O00409 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
FOXN3O00409 RNU6-609P-201ENST00000365459 107 ntBASIC6.4□□□□□ -1.38
FOXN3O00409 RNU6-925P-201ENST00000384629 104 ntBASIC6.4□□□□□ -1.38
FOXN3O00409 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
FOXN3O00409 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.4□□□□□ -1.38
FOXN3O00409 RPL35AP3-201ENST00000414680 288 ntBASIC6.4□□□□□ -1.38
FOXN3O00409 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.4□□□□□ -1.38
FOXN3O00409 AC092570.3-201ENST00000420113 693 ntBASIC6.4□□□□□ -1.38
FOXN3O00409 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
FOXN3O00409 AC046176.1-201ENST00000435260 1170 ntBASIC6.4□□□□□ -1.38
FOXN3O00409 RPS12P17-201ENST00000438591 377 ntBASIC6.4□□□□□ -1.38
FOXN3O00409 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
FOXN3O00409 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.4□□□□□ -1.38
FOXN3O00409 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.4□□□□□ -1.38
FOXN3O00409 AC108751.3-201ENST00000461814 1020 ntBASIC6.4□□□□□ -1.38
FOXN3O00409 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.4□□□□□ -1.38
FOXN3O00409 RN7SKP35-201ENST00000517210 151 ntBASIC6.4□□□□□ -1.38
FOXN3O00409 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.4□□□□□ -1.38
FOXN3O00409 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.4□□□□□ -1.38
FOXN3O00409 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.4□□□□□ -1.38
FOXN3O00409 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.4□□□□□ -1.38
FOXN3O00409 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.4□□□□□ -1.38
FOXN3O00409 AC027026.1-201ENST00000532323 742 ntBASIC6.4□□□□□ -1.38
FOXN3O00409 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.4□□□□□ -1.38
FOXN3O00409 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
FOXN3O00409 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.4□□□□□ -1.38
FOXN3O00409 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.4□□□□□ -1.38
FOXN3O00409 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.4□□□□□ -1.38
FOXN3O00409 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
FOXN3O00409 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.4□□□□□ -1.38
FOXN3O00409 AC090330.1-201ENST00000588646 764 ntBASIC6.4□□□□□ -1.38
FOXN3O00409 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.4□□□□□ -1.38
FOXN3O00409 AC015849.2-201ENST00000605738 409 ntBASIC6.4□□□□□ -1.38
FOXN3O00409 AC005021.1-201ENST00000608730 355 ntBASIC6.4□□□□□ -1.38
FOXN3O00409 AC016957.2-201ENST00000616998 848 ntBASIC6.4□□□□□ -1.38
FOXN3O00409 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.4□□□□□ -1.38
FOXN3O00409 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
FOXN3O00409 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms