Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM1O00151 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM1O00151 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.53□□□□□ -1.52
PDLIM1O00151 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM1O00151 MIR3154-201ENST00000577829 84 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM1O00151 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM1O00151 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.53□□□□□ -1.52
PDLIM1O00151 RPSAP75-201ENST00000605848 301 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM1O00151 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.53□□□□□ -1.52
PDLIM1O00151 CASC19-274ENST00000642018 970 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 AC093225.1-201ENST00000506867 1408 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PDLIM1O00151 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM1O00151 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM1O00151 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM1O00151 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM1O00151 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.53□□□□□ -1.52
PDLIM1O00151 AC104964.3-201ENST00000606115 2860 ntBASIC5.53□□□□□ -1.52
PDLIM1O00151 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.53□□□□□ -1.52
PDLIM1O00151 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PDLIM1O00151 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM1O00151 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM1O00151 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PDLIM1O00151 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PDLIM1O00151 RNA5SP232-201ENST00000364144 119 ntBASIC5.52□□□□□ -1.53
PDLIM1O00151 RN7SKP292-201ENST00000365522 317 ntBASIC5.52□□□□□ -1.53
PDLIM1O00151 RN7SKP187-201ENST00000365536 330 ntBASIC5.52□□□□□ -1.53
PDLIM1O00151 SNORA81-201ENST00000408493 178 ntBASIC5.52□□□□□ -1.53
PDLIM1O00151 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM1O00151 RPS15AP30-201ENST00000420976 390 ntBASIC5.52□□□□□ -1.53
PDLIM1O00151 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM1O00151 AL645936.1-201ENST00000441979 518 ntBASIC5.52□□□□□ -1.53
PDLIM1O00151 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM1O00151 AC093166.3-201ENST00000448785 303 ntBASIC5.52□□□□□ -1.53
PDLIM1O00151 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM1O00151 HSD3BP3-201ENST00000514706 994 ntBASIC5.52□□□□□ -1.53
PDLIM1O00151 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM1O00151 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM1O00151 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM1O00151 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM1O00151 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM1O00151 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM1O00151 AC002519.2-203ENST00000567043 837 ntBASIC5.52□□□□□ -1.53
PDLIM1O00151 AL353729.2-201ENST00000605859 1249 ntBASIC5.52□□□□□ -1.53
PDLIM1O00151 AL683826.1-201ENST00000624104 627 ntBASIC5.52□□□□□ -1.53
PDLIM1O00151 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM1O00151 AL357140.4-201ENST00000636827 412 ntBASIC5.52□□□□□ -1.53
PDLIM1O00151 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM1O00151 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
PDLIM1O00151 AC138627.1-204ENST00000641894 765 ntBASIC5.52□□□□□ -1.53
PDLIM1O00151 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM1O00151 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM1O00151 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM1O00151 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
PDLIM1O00151 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PDLIM1O00151 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PDLIM1O00151 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM1O00151 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM1O00151 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM1O00151 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
PDLIM1O00151 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM1O00151 AC093591.2-201ENST00000565254 3843 ntBASIC5.51□□□□□ -1.53
PDLIM1O00151 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PDLIM1O00151 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM1O00151 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM1O00151 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PDLIM1O00151 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM1O00151 AC004817.4-201ENST00000602396 3625 ntBASIC5.51□□□□□ -1.53
PDLIM1O00151 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PDLIM1O00151 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM1O00151 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM1O00151 AC107977.1-201ENST00000355745 939 ntBASIC5.51□□□□□ -1.53
PDLIM1O00151 OR10R3P-201ENST00000361688 942 ntBASIC5.51□□□□□ -1.53
PDLIM1O00151 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.51□□□□□ -1.53
PDLIM1O00151 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM1O00151 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.51□□□□□ -1.53
PDLIM1O00151 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM1O00151 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PDLIM1O00151 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PDLIM1O00151 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.51□□□□□ -1.53
PDLIM1O00151 AL157385.1-201ENST00000446973 268 ntBASIC5.51□□□□□ -1.53
PDLIM1O00151 HIGD1AP16-201ENST00000450986 258 ntBASIC5.51□□□□□ -1.53
PDLIM1O00151 AL359839.1-201ENST00000451975 1160 ntBASIC5.51□□□□□ -1.53
PDLIM1O00151 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM1O00151 AC118758.1-202ENST00000454719 225 ntBASIC5.51□□□□□ -1.53
PDLIM1O00151 CTSLP6-201ENST00000458273 1002 ntBASIC5.51□□□□□ -1.53
PDLIM1O00151 RNU7-157P-201ENST00000459600 66 ntBASIC5.51□□□□□ -1.53
PDLIM1O00151 RN7SL168P-201ENST00000463821 279 ntBASIC5.51□□□□□ -1.53
PDLIM1O00151 RN7SL515P-201ENST00000463999 297 ntBASIC5.51□□□□□ -1.53
PDLIM1O00151 AC104339.1-201ENST00000465478 348 ntBASIC5.51□□□□□ -1.53
PDLIM1O00151 RPL38P3-201ENST00000484463 213 ntBASIC5.51□□□□□ -1.53
PDLIM1O00151 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.51□□□□□ -1.53
PDLIM1O00151 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.51□□□□□ -1.53
PDLIM1O00151 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.51□□□□□ -1.53
PDLIM1O00151 SEPT10P1-201ENST00000517342 1162 ntBASIC5.51□□□□□ -1.53
PDLIM1O00151 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.51□□□□□ -1.53
PDLIM1O00151 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM1O00151 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms