Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 AC114774.1-201ENST00000507410 1770 ntBASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 UGT2B24P-201ENST00000514441 1597 ntBASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 U3.23-201ENST00000391132 200 ntBASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 AL391422.1-201ENST00000402155 436 ntBASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 MIR1178-201ENST00000408396 91 ntBASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 Z93019.1-201ENST00000416450 973 ntBASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 RPS4XP5-201ENST00000419038 768 ntBASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 AL355433.1-201ENST00000422804 300 ntBASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 SIAH1P1-201ENST00000479411 923 ntBASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 SNORA43.3-201ENST00000517240 103 ntBASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 AC244502.2-201ENST00000543361 851 ntBASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 AC023389.2-201ENST00000580031 955 ntBASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 RNU4ATAC-201ENST00000580972 127 ntBASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 AC211433.2-201ENST00000608433 387 ntBASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 CU639417.4-201ENST00000623928 207 ntBASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 MAPK10-350ENST00000641777 965 ntBASIC5.65□□□□□ -1.5
TMX2-CTNND1H3BSU7 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
TMX2-CTNND1H3BSU7 THAP12P9-201ENST00000503971 2360 ntBASIC5.65□□□□□ -1.51
TMX2-CTNND1H3BSU7 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TMX2-CTNND1H3BSU7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.65□□□□□ -1.51
TMX2-CTNND1H3BSU7 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TMX2-CTNND1H3BSU7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 AL161756.3-201ENST00000641216 2071 ntBASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 RNA5SP500-201ENST00000364486 119 ntBASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 AP000534.2-201ENST00000412729 568 ntBASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 NPM1P4-201ENST00000414095 812 ntBASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 PTCD2P2-201ENST00000415579 1095 ntBASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC127526.2-201ENST00000426436 775 ntBASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC099670.2-201ENST00000435130 321 ntBASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 AL450996.1-201ENST00000445574 1202 ntBASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 OR2AO1P-201ENST00000476497 403 ntBASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 OR5D2P-201ENST00000524390 911 ntBASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 HMGB1P42-201ENST00000532126 553 ntBASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 AL445670.1-201ENST00000618889 801 ntBASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TMX2-CTNND1H3BSU7 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms