Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 OR7E157P-201ENST00000494376 911 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AC016550.1-201ENST00000505348 785 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 HSD3BP3-201ENST00000514706 994 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 Vault.2-201ENST00000516519 98 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 OR8Q1P-201ENST00000526467 655 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AC137627.1-201ENST00000545761 289 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 NPM1P5-201ENST00000557228 838 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AC138207.8-204ENST00000579588 527 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 MIR4776-2-201ENST00000580204 80 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AP006248.3-201ENST00000623580 594 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AP003499.2-201ENST00000624100 483 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AC010872.1-201ENST00000624225 675 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AC009962.1-201ENST00000567327 3813 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 UGT2B24P-201ENST00000514441 1597 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 CASC19-238ENST00000641523 1558 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC239868.2-201ENST00000564237 4527 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC068870.1-201ENST00000563737 2455 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC117409.1-201ENST00000470499 1310 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AP000568.1-201ENST00000282964 442 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 RN7SKP185-201ENST00000362813 326 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 RNA5SP232-201ENST00000364144 119 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 MIR130A-201ENST00000385274 89 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 CXADRP1-201ENST00000398098 1095 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC016739.1-201ENST00000405359 345 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 RPS21P8-201ENST00000413365 247 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 MRPL53P1-201ENST00000414323 319 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AL359885.1-201ENST00000415786 903 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 VN1R31P-201ENST00000417498 730 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 MTCO1P45-201ENST00000431457 267 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 ATP5LP2-201ENST00000440646 311 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 OR7E116P-201ENST00000448529 957 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 RPL31P20-201ENST00000449593 360 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC104339.1-201ENST00000465478 348 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC135999.1-201ENST00000478962 479 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC021006.1-201ENST00000489849 553 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 RN7SL193P-201ENST00000491708 276 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 RN7SL612P-201ENST00000497704 295 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 PCNAP1-201ENST00000505363 709 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC093815.1-201ENST00000508637 280 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 MTATP6P9-201ENST00000515039 680 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC139697.1-201ENST00000548429 745 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC096996.1-201ENST00000563813 325 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC002519.2-203ENST00000567043 837 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 DHFRP1-201ENST00000579682 559 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 MIMT1-201ENST00000597105 1050 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AL136131.3-201ENST00000607600 188 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC120053.1-201ENST00000607706 736 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AL356608.1-201ENST00000610034 820 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms