Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 UBFD1P1-201ENST00000473259 814 ntBASIC5□□□□□ -1.61
TRAV27A0A087WT01 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRAV27A0A087WT01 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 AC006499.4-201ENST00000510947 694 ntBASIC5□□□□□ -1.61
TRAV27A0A087WT01 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 OR4A43P-201ENST00000532938 908 ntBASIC5□□□□□ -1.61
TRAV27A0A087WT01 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRAV27A0A087WT01 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 AC009237.13-201ENST00000603193 276 ntBASIC5□□□□□ -1.61
TRAV27A0A087WT01 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 AC025574.2-201ENST00000615621 514 ntBASIC5□□□□□ -1.61
TRAV27A0A087WT01 Six3os1_2.1-201ENST00000616963 217 ntBASIC5□□□□□ -1.61
TRAV27A0A087WT01 AC244100.4-201ENST00000617747 388 ntBASIC5□□□□□ -1.61
TRAV27A0A087WT01 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 AC073593.1-201ENST00000624500 411 ntBASIC5□□□□□ -1.61
TRAV27A0A087WT01 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 AL596275.2-207ENST00000641188 675 ntBASIC5□□□□□ -1.61
TRAV27A0A087WT01 SRRM1P3-201ENST00000426911 2678 ntBASIC5□□□□□ -1.61
TRAV27A0A087WT01 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 Z95114.1-201ENST00000624264 14574 ntBASIC5□□□□□ -1.61
TRAV27A0A087WT01 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRAV27A0A087WT01 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRAV27A0A087WT01 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRAV27A0A087WT01 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRAV27A0A087WT01 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 AC003973.3-201ENST00000624863 2822 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 MIR133A2-201ENST00000347538 102 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 RNA5SP433-201ENST00000364491 114 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 SNORA5.1-201ENST00000384275 131 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 HMGB1P20-201ENST00000402555 677 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 PPIAP9-201ENST00000403866 498 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 AP006222.1-205ENST00000450734 457 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 AP000547.1-201ENST00000454360 617 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 RN7SL170P-201ENST00000487098 295 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 AC091912.1-201ENST00000511351 248 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 TRIM77BP-201ENST00000524985 1119 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 AC023310.2-201ENST00000553844 547 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 AC009779.8-202ENST00000607990 932 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 MIR7109-201ENST00000613748 65 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 AC009120.7-201ENST00000623452 780 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 NCOA4P2-201ENST00000340589 1813 ntBASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRAV27A0A087WT01 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 MIR375-201ENST00000362103 64 ntBASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 RN7SKP275-201ENST00000364626 301 ntBASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 AC079809.1-201ENST00000415468 276 ntBASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms