Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC007275.1-201ENST00000621243 671 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC010435.1-201ENST00000623353 1177 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC073488.6-201ENST00000632293 754 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 TMEM30CP-203ENST00000637814 1035 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 MTCO1P15-201ENST00000529569 1526 ntBASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
COL4A3BPQ9Y5P4 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 RNU6-532P-201ENST00000384318 107 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 RN7SKP108-201ENST00000411367 328 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 OR5W1P-201ENST00000423705 938 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AL354707.3-201ENST00000427308 331 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AC007679.3-201ENST00000434035 414 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 YWHAZP2-201ENST00000440317 728 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 RPL34P26-201ENST00000445636 354 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 MORF4-201ENST00000447135 971 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 HMGB1P26-201ENST00000452520 628 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AL133351.3-201ENST00000454998 193 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 RN7SL326P-201ENST00000477493 296 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 RPL12P30-201ENST00000488389 499 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 SNX18P24-201ENST00000505249 671 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AC095052.1-201ENST00000509955 863 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AC010476.1-201ENST00000519111 851 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AC106730.2-201ENST00000566641 540 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AC002310.3-201ENST00000569728 723 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 GLYATL1P2-202ENST00000588046 902 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AC018618.2-201ENST00000604770 446 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AC006924.1-201ENST00000610750 559 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AC016597.2-201ENST00000613256 341 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AC011472.4-201ENST00000615848 491 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 RMST_10.1-201ENST00000616309 154 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 MIR6071-201ENST00000616741 78 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AC021106.3-201ENST00000623925 531 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AL356118.1-201ENST00000635272 1078 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AL022323.4-201ENST00000623980 13120 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 AL161912.4-201ENST00000623889 2468 ntBASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
COL4A3BPQ9Y5P4 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL4A3BPQ9Y5P4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
COL4A3BPQ9Y5P4 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.98□□□□□ -1.29
COL4A3BPQ9Y5P4 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.98□□□□□ -1.29
COL4A3BPQ9Y5P4 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL4A3BPQ9Y5P4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
COL4A3BPQ9Y5P4 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL4A3BPQ9Y5P4 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
COL4A3BPQ9Y5P4 RNA5SP346-201ENST00000363541 121 ntBASIC6.98□□□□□ -1.29
COL4A3BPQ9Y5P4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
COL4A3BPQ9Y5P4 TMA16P2-201ENST00000413187 601 ntBASIC6.98□□□□□ -1.29
COL4A3BPQ9Y5P4 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.98□□□□□ -1.29
COL4A3BPQ9Y5P4 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.98□□□□□ -1.29
COL4A3BPQ9Y5P4 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms