Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AL353763.1-201ENST00000624467 1628 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 TMSB4XP4-201ENST00000323496 618 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 SNORA51.1-201ENST00000363243 140 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 RNU1-59P-201ENST00000364829 162 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 TRAV35-201ENST00000390462 330 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AL096800.1-201ENST00000405326 893 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 REREP1Y-201ENST00000422655 198 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AC073310.1-201ENST00000423226 1033 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AC013410.1-201ENST00000436223 1232 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 REREP2Y-201ENST00000439103 200 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AC016908.1-201ENST00000442571 1219 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 GAPDHP23-201ENST00000444823 993 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AP006222.1-205ENST00000450734 457 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AL445665.1-202ENST00000452436 324 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 MTND2P30-201ENST00000456663 382 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AC117525.1-201ENST00000515228 503 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 ZNF322P1-201ENST00000568013 1209 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AC008555.7-201ENST00000605008 583 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AC084036.1-201ENST00000609190 508 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AC096586.2-201ENST00000610260 441 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 U1.25-201ENST00000614085 162 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AL590410.1-201ENST00000617925 333 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 U1.34-201ENST00000618578 162 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 U1.31-201ENST00000620022 160 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AC119674.1-220ENST00000641502 1048 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 HSPA8P19-201ENST00000505359 1517 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 GNL2P1-201ENST00000451274 2190 ntBASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SSX2IPQ9Y2D8 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 AC015689.2-201ENST00000528172 1738 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 RBPJP7-201ENST00000442803 1447 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 RBPJP5-201ENST00000449433 1447 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 SNORA43.1-201ENST00000364863 140 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 AL445238.1-204ENST00000400311 463 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 MIR1203-201ENST00000408812 85 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 AL606490.8-201ENST00000441624 319 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 AC009237.1-201ENST00000442127 744 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 MTND2P25-201ENST00000449028 610 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 FCF1P6-201ENST00000456841 595 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 RNA5SP400-201ENST00000517155 111 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 TMEM97P2-201ENST00000517841 403 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms