Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 UGP2-232ENST00000640075 567 ntTSL 5 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AC140479.2-201ENST00000421567 3130 ntBASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 HSPA8P18-201ENST00000439846 1928 ntBASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 RN7SKP6-201ENST00000364795 319 ntBASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 PDCL3P4-201ENST00000489621 720 ntBASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AP002799.1-201ENST00000623552 423 ntBASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
SHANK2Q9UPX8 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 AL356317.1-201ENST00000396110 1436 ntBASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 MT-RNR2-201ENST00000387347 1559 ntBASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 AC005725.1-201ENST00000577346 2607 ntBASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 SNORA67-201ENST00000384423 137 ntBASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 RNU1-149P-201ENST00000390870 161 ntBASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 MTND6P2-201ENST00000512226 524 ntBASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 AC137627.1-201ENST00000545761 289 ntBASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 OR55B1P-203ENST00000641518 2602 ntBASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.25□□□□□ -1.09
SHANK2Q9UPX8 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 AC018809.2-201ENST00000602436 3823 ntBASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 EEF1A1P33-201ENST00000554413 1362 ntBASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 DUTP5-201ENST00000406790 469 ntBASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 RPS26P38-201ENST00000414476 348 ntBASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 AC245028.1-201ENST00000423259 256 ntBASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 GAPDHP25-201ENST00000447061 1001 ntBASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 AC105233.1-201ENST00000498840 781 ntBASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 AC021106.1-201ENST00000509020 1058 ntBASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 AC020937.1-201ENST00000519677 1013 ntBASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 AC006116.3-201ENST00000592968 361 ntBASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 AL133481.2-203ENST00000607558 139 ntBASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 LINC01739-205ENST00000641890 573 ntBASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 AC005225.5-201ENST00000623547 2225 ntBASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHANK2Q9UPX8 AC012618.3-205ENST00000637896 1496 ntBASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHANK2Q9UPX8 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms