Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC139365.2-201ENST00000517972 253 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 IGLV3-30-201ENST00000524362 298 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 AC096996.1-201ENST00000563813 325 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 AC023389.2-201ENST00000580031 955 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 AL583832.1-201ENST00000603227 784 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 AC013244.1-201ENST00000604279 193 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 RPL12P48-201ENST00000605620 304 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 AC022919.1-201ENST00000624979 626 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 AC016745.2-201ENST00000608834 3443 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 ADAM24P-201ENST00000398655 2101 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 AC004158.1-201ENST00000564508 4319 ntBASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 RN7SKP186-201ENST00000365371 303 ntBASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 RNA5SP91-201ENST00000390902 119 ntBASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 RN7SKP279-201ENST00000411383 298 ntBASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 AC245060.4-201ENST00000413293 1121 ntBASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 METTL15P3-201ENST00000415522 1221 ntBASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 RNGTTP1-201ENST00000420965 728 ntBASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 RPS23P2-201ENST00000463671 415 ntBASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 RN7SL273P-201ENST00000481561 299 ntBASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 SNORA70.20-201ENST00000516848 126 ntBASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 SCARNA6.1-201ENST00000516989 238 ntBASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 AC021678.3-201ENST00000517893 476 ntBASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 AC060780.2-201ENST00000589047 198 ntBASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CTNNA3Q9UI47 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 NIFKP3-201ENST00000417799 865 ntBASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 AL022331.1-201ENST00000429025 477 ntBASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 GAPDHP48-201ENST00000436626 961 ntBASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 RPL12P39-201ENST00000455456 496 ntBASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 AC007225.2-201ENST00000562529 256 ntBASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 HIRAP1-201ENST00000605318 787 ntBASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 AC090607.5-201ENST00000615692 224 ntBASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 OR4G1P-202ENST00000641173 1788 ntBASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTNNA3Q9UI47 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CTNNA3Q9UI47 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.85□□□□□ -1.31
CTNNA3Q9UI47 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.85□□□□□ -1.31
CTNNA3Q9UI47 OR52B3P-201ENST00000314715 928 ntBASIC6.85□□□□□ -1.31
CTNNA3Q9UI47 MIR375-201ENST00000362103 64 ntBASIC6.85□□□□□ -1.31
CTNNA3Q9UI47 RNA5SP453-201ENST00000362503 119 ntBASIC6.85□□□□□ -1.31
CTNNA3Q9UI47 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.85□□□□□ -1.31
CTNNA3Q9UI47 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.85□□□□□ -1.31
CTNNA3Q9UI47 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.85□□□□□ -1.31
CTNNA3Q9UI47 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.85□□□□□ -1.31
CTNNA3Q9UI47 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.85□□□□□ -1.31
CTNNA3Q9UI47 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.85□□□□□ -1.31
CTNNA3Q9UI47 AC090602.1-201ENST00000469695 252 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms