Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL159987.1-201ENST00000347911 293 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 RNA5SP46-201ENST00000362370 120 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL20A1Q9P218 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL20A1Q9P218 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.63□□□□□ -1.35
COL20A1Q9P218 RNU6-1176P-201ENST00000390955 107 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL20A1Q9P218 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.63□□□□□ -1.35
COL20A1Q9P218 AL596448.1-201ENST00000415024 392 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 BMS1P17-202ENST00000416720 316 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.63□□□□□ -1.35
COL20A1Q9P218 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.63□□□□□ -1.35
COL20A1Q9P218 RPL34P3-201ENST00000421454 338 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 OR5W1P-201ENST00000423705 938 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 DEFA9P-201ENST00000433042 285 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 AC023141.8-201ENST00000442554 208 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL20A1Q9P218 AC004129.2-201ENST00000457229 287 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 AC015908.1-201ENST00000478739 476 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 AC099521.1-201ENST00000482557 334 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL20A1Q9P218 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.63□□□□□ -1.35
COL20A1Q9P218 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.63□□□□□ -1.35
COL20A1Q9P218 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.63□□□□□ -1.35
COL20A1Q9P218 SCARNA6.1-201ENST00000516989 238 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 AC008429.4-201ENST00000521201 182 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 MRPS16P1-201ENST00000523462 412 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.63□□□□□ -1.35
COL20A1Q9P218 AC022404.1-201ENST00000555320 273 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL20A1Q9P218 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.63□□□□□ -1.35
COL20A1Q9P218 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.63□□□□□ -1.35
COL20A1Q9P218 MIMT1-201ENST00000597105 1050 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.63□□□□□ -1.35
COL20A1Q9P218 BNIP3P39-201ENST00000601077 554 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 HMGB1P51-201ENST00000605166 638 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 AL445670.1-201ENST00000618889 801 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.63□□□□□ -1.35
COL20A1Q9P218 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.63□□□□□ -1.35
COL20A1Q9P218 AL049767.1-202ENST00000637826 242 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL20A1Q9P218 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL20A1Q9P218 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL20A1Q9P218 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
COL20A1Q9P218 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL20A1Q9P218 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL20A1Q9P218 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL20A1Q9P218 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL20A1Q9P218 OR10AB1P-202ENST00000641219 1686 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL20A1Q9P218 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.62□□□□□ -1.35
COL20A1Q9P218 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL20A1Q9P218 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL20A1Q9P218 AL132656.3-201ENST00000606384 1595 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL20A1Q9P218 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL20A1Q9P218 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.62□□□□□ -1.35
COL20A1Q9P218 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL20A1Q9P218 AL136520.1-201ENST00000600311 1322 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 AC005725.1-201ENST00000577346 2607 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL20A1Q9P218 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
COL20A1Q9P218 AL360271.1-201ENST00000395679 510 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 AL356057.1-202ENST00000402263 756 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 AC019205.1-201ENST00000421830 730 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 MTCO1P45-201ENST00000431457 267 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.62□□□□□ -1.35
COL20A1Q9P218 AC073909.1-201ENST00000447112 999 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 FRG2FP-204ENST00000453982 852 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 AC022215.1-201ENST00000481770 362 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 AC090543.1-201ENST00000492168 485 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
COL20A1Q9P218 HMGB1P47-201ENST00000511281 589 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.62□□□□□ -1.35
COL20A1Q9P218 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.62□□□□□ -1.35
COL20A1Q9P218 HMGB1P42-201ENST00000532126 553 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.62□□□□□ -1.35
COL20A1Q9P218 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.62□□□□□ -1.35
COL20A1Q9P218 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.62□□□□□ -1.35
COL20A1Q9P218 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.62□□□□□ -1.35
COL20A1Q9P218 AL133247.2-201ENST00000603236 482 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 AL356608.1-201ENST00000610034 820 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 AP003499.2-201ENST00000624100 483 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL20A1Q9P218 GTF2IP4-201ENST00000453092 2054 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL20A1Q9P218 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL20A1Q9P218 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.62□□□□□ -1.35
COL20A1Q9P218 SRRM1P3-201ENST00000426911 2678 ntBASIC6.62□□□□□ -1.35
COL20A1Q9P218 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 AC005261.6-201ENST00000623072 1387 ntBASIC6.61□□□□□ -1.35
COL20A1Q9P218 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL20A1Q9P218 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL20A1Q9P218 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
COL20A1Q9P218 SEPT7P8-201ENST00000413308 775 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms