Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL158827.1-201ENST00000416300 391 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 RPL35AP31-201ENST00000418340 337 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 RPL12P12-201ENST00000424633 501 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AC046176.1-201ENST00000435260 1170 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AL663074.2-201ENST00000440621 479 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 PA2G4P1-201ENST00000442248 1197 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 VN1R48P-201ENST00000448149 1036 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 RBMY2HP-201ENST00000457961 720 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AC083795.1-201ENST00000491760 320 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 PCNAP1-201ENST00000505363 709 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 MIR2117-201ENST00000516780 80 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AC036111.2-201ENST00000533247 901 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AL358913.1-201ENST00000554342 121 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 MIR3157-201ENST00000578688 85 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AP005136.2-201ENST00000583253 1049 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AC012368.3-201ENST00000604190 219 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AL645933.2-201ENST00000606743 1207 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AL135786.2-201ENST00000608422 615 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 RFPL4AP6-201ENST00000616792 846 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS33AQ96AX1 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.65□□□□□ -1.51
VPS33AQ96AX1 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.65□□□□□ -1.51
VPS33AQ96AX1 MRRFP1-201ENST00000435941 1675 ntBASIC5.65□□□□□ -1.51
VPS33AQ96AX1 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 CASC19-281ENST00000642118 1554 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 RN7SKP257-201ENST00000364525 309 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 PRELID1P1-201ENST00000403549 660 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AL132875.1-201ENST00000403623 949 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AC099677.3-201ENST00000427081 395 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 CRIP1P1-201ENST00000427567 185 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 TRIM60P13-201ENST00000432350 1283 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AC242426.1-201ENST00000435270 960 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 RPS12P17-201ENST00000438591 377 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AL512637.1-201ENST00000439523 1231 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AC114878.1-201ENST00000441166 358 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AC234771.2-201ENST00000445718 597 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 NPM1P19-201ENST00000450070 712 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AL445991.1-201ENST00000450381 475 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 MTND3P4-201ENST00000453537 303 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 RPSAP39-201ENST00000467439 883 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AC092868.3-201ENST00000560515 784 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AL513327.3-201ENST00000602618 469 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 SMIM12P1-201ENST00000603004 274 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AC019131.2-201ENST00000609071 870 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AC074140.1-201ENST00000621617 208 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AC020763.5-201ENST00000623298 430 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AC022400.9-201ENST00000623633 273 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AL357562.1-201ENST00000624911 609 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS33AQ96AX1 AL606537.1-201ENST00000607258 2011 ntBASIC5.64□□□□□ -1.51
VPS33AQ96AX1 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 AC110792.3-201ENST00000595906 1614 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms