Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC8.06□□□□□ -1.12
HLA-CQ95604 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC8.06□□□□□ -1.12
HLA-CQ95604 AC105029.1-201ENST00000520250 669 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-CQ95604 SLC2A13P1-201ENST00000531560 322 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC8.06□□□□□ -1.12
HLA-CQ95604 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC8.06□□□□□ -1.12
HLA-CQ95604 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC8.06□□□□□ -1.12
HLA-CQ95604 AC126177.6-201ENST00000550420 1009 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC084033.3-201ENST00000551421 451 ntTSL 2 BASIC8.06□□□□□ -1.12
HLA-CQ95604 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC8.06□□□□□ -1.12
HLA-CQ95604 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC8.06□□□□□ -1.12
HLA-CQ95604 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC8.06□□□□□ -1.12
HLA-CQ95604 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC8.06□□□□□ -1.12
HLA-CQ95604 AC245014.2-201ENST00000603689 287 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC091488.1-201ENST00000604239 660 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC004852.1-201ENST00000605206 154 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC246785.4-201ENST00000605374 287 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AL133255.1-201ENST00000606374 441 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC090948.2-201ENST00000607363 564 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC243830.2-201ENST00000618067 630 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC8.06□□□□□ -1.12
HLA-CQ95604 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC8.06□□□□□ -1.12
HLA-CQ95604 TEX41-293ENST00000630451 690 ntTSL 5 BASIC8.06□□□□□ -1.12
HLA-CQ95604 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
HLA-CQ95604 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-CQ95604 MTCO1P9-201ENST00000505577 1534 ntBASIC8.06□□□□□ -1.12
HLA-CQ95604 AC000036.1-201ENST00000449652 2030 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-CQ95604 ZNF30-204ENST00000601142 2280 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
HLA-CQ95604 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-CQ95604 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-CQ95604 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-CQ95604 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
HLA-CQ95604 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
HLA-CQ95604 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
HLA-CQ95604 SIRT5-201ENST00000359782 3797 ntTSL 2 BASIC8.06□□□□□ -1.12
HLA-CQ95604 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC8.06□□□□□ -1.12
HLA-CQ95604 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-CQ95604 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 ZNF733P-202ENST00000444809 1573 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
HLA-CQ95604 AC013444.1-201ENST00000428909 1904 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 GPR182-201ENST00000300098 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
HLA-CQ95604 Z97200.1-201ENST00000606154 2045 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC8.05□□□□□ -1.12
HLA-CQ95604 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 FAM205BP-202ENST00000399773 4009 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 AC009220.2-201ENST00000489759 1751 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-CQ95604 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 MAPK10-333ENST00000641607 2481 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC8.05□□□□□ -1.12
HLA-CQ95604 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
HLA-CQ95604 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
HLA-CQ95604 Y_RNA.138-201ENST00000363462 102 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
HLA-CQ95604 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 RAB28P1-201ENST00000411517 641 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 YWHAZP3-201ENST00000415292 738 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 RPL26P29-201ENST00000415623 438 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 BX295541.1-201ENST00000417774 250 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC8.05□□□□□ -1.12
HLA-CQ95604 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC8.05□□□□□ -1.12
HLA-CQ95604 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC8.05□□□□□ -1.12
HLA-CQ95604 TEX41-204ENST00000423031 491 ntTSL 4 BASIC8.05□□□□□ -1.12
HLA-CQ95604 RPL21P110-201ENST00000433345 446 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 RPEP4-201ENST00000437636 602 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.05□□□□□ -1.12
HLA-CQ95604 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-CQ95604 GCNT1P5-201ENST00000449274 682 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 RPL31P15-201ENST00000449770 338 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-CQ95604 Z82190.1-201ENST00000454534 490 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC8.05□□□□□ -1.12
HLA-CQ95604 AC110749.1-201ENST00000462007 357 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 AC130509.1-201ENST00000464158 433 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-CQ95604 AC093278.1-201ENST00000494700 600 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 AC079768.1-201ENST00000503181 711 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 NIFKP7-201ENST00000503365 834 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC8.05□□□□□ -1.12
HLA-CQ95604 AC095059.2-201ENST00000510601 933 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 RPL10P19-201ENST00000519013 301 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 OR7E96P-201ENST00000530816 976 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC8.05□□□□□ -1.12
HLA-CQ95604 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-CQ95604 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-CQ95604 HIF1AP1-201ENST00000553642 175 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 RPL21P5-201ENST00000554662 472 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 AL355375.2-201ENST00000574825 175 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC8.05□□□□□ -1.12
HLA-CQ95604 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms