Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 COX6B1P3-201ENST00000312310 260 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 RN7SKP185-201ENST00000362813 326 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 RNA5SP500-201ENST00000364486 119 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 RNGTTP1-201ENST00000420965 728 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 AC019205.1-201ENST00000421830 730 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 AL354766.1-201ENST00000423396 542 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 AC126120.1-201ENST00000431082 470 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 ARAFP2-201ENST00000440565 559 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 TIMM8BP2-201ENST00000445940 251 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 NPM1P28-201ENST00000492269 840 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 GAPDHP71-201ENST00000511530 1003 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 AP003396.4-201ENST00000527574 265 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 PCNAP4-201ENST00000532690 730 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 AC137627.1-201ENST00000545761 289 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 AC139697.1-201ENST00000548429 745 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 AC018809.2-201ENST00000602436 3823 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 AC073575.2-201ENST00000614212 627 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 LYARP1-201ENST00000436977 1501 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 AC004158.1-201ENST00000564508 4319 ntBASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 SAMMSON-213ENST00000641336 1521 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AL355488.2-201ENST00000609909 2850 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 SETP10-201ENST00000424368 814 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 MTND2P40-201ENST00000436718 841 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 TUBB4BP6-201ENST00000437576 479 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AMYP1-201ENST00000440059 1023 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 PPIAP27-201ENST00000453800 265 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AC068228.1-201ENST00000461723 211 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 RPL32P33-201ENST00000487023 394 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 RBBP4P1-201ENST00000502424 1276 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AC084121.1-201ENST00000533882 835 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AC079905.1-201ENST00000549280 475 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 CYCSP38-201ENST00000559840 322 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AC096996.1-201ENST00000563813 325 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 DHFRP1-201ENST00000579682 559 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AC008507.3-201ENST00000585753 472 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AC090236.2-201ENST00000587933 1101 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 FAM27E4-201ENST00000605259 342 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 AL683826.1-201ENST00000624104 627 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 CASC19-238ENST00000641523 1558 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 ABCC13-202ENST00000463099 3842 ntBASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.45□□□□□ -1.54
CLHC1Q8NHS4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms